Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Gm37820-201ENSMUST00000194021 2147 ntBASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-7A0A075B6B0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-7A0A075B6B0 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav6d-7A0A075B6B0 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav6d-7A0A075B6B0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-7A0A075B6B0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav6d-7A0A075B6B0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav6d-7A0A075B6B0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-7A0A075B6B0 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-7A0A075B6B0 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-7A0A075B6B0 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-7A0A075B6B0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav6d-7A0A075B6B0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav6d-7A0A075B6B0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.9□□□□□ -0.34
Trav6d-7A0A075B6B0 Gm15565-201ENSMUST00000118890 427 ntBASIC12.9□□□□□ -0.34
Trav6d-7A0A075B6B0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.9□□□□□ -0.34
Trav6d-7A0A075B6B0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-7A0A075B6B0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-7A0A075B6B0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-7A0A075B6B0 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.9□□□□□ -0.34
Trav6d-7A0A075B6B0 Timm23-208ENSMUST00000226683 750 ntBASIC12.9□□□□□ -0.34
Trav6d-7A0A075B6B0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-7A0A075B6B0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav6d-7A0A075B6B0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav6d-7A0A075B6B0 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Trav6d-7A0A075B6B0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav6d-7A0A075B6B0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-7A0A075B6B0 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-7A0A075B6B0 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-7A0A075B6B0 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav6d-7A0A075B6B0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-7A0A075B6B0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-7A0A075B6B0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-7A0A075B6B0 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-7A0A075B6B0 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-7A0A075B6B0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-7A0A075B6B0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-7A0A075B6B0 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-7A0A075B6B0 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav6d-7A0A075B6B0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav6d-7A0A075B6B0 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-7A0A075B6B0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav6d-7A0A075B6B0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC12.89□□□□□ -0.35
Trav6d-7A0A075B6B0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-7A0A075B6B0 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.89□□□□□ -0.35
Trav6d-7A0A075B6B0 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.89□□□□□ -0.35
Trav6d-7A0A075B6B0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.89□□□□□ -0.35
Trav6d-7A0A075B6B0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Trav6d-7A0A075B6B0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav6d-7A0A075B6B0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-7A0A075B6B0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav6d-7A0A075B6B0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC12.89□□□□□ -0.35
Trav6d-7A0A075B6B0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-7A0A075B6B0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-7A0A075B6B0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav6d-7A0A075B6B0 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-7A0A075B6B0 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-7A0A075B6B0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-7A0A075B6B0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav6d-7A0A075B6B0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-7A0A075B6B0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-7A0A075B6B0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-7A0A075B6B0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-7A0A075B6B0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-7A0A075B6B0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Trav6d-7A0A075B6B0 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-7A0A075B6B0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-7A0A075B6B0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Trav6d-7A0A075B6B0 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.88□□□□□ -0.35
Trav6d-7A0A075B6B0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Trav6d-7A0A075B6B0 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.88□□□□□ -0.35
Trav6d-7A0A075B6B0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.88□□□□□ -0.35
Trav6d-7A0A075B6B0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-7A0A075B6B0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-7A0A075B6B0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-7A0A075B6B0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-7A0A075B6B0 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-7A0A075B6B0 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-7A0A075B6B0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-7A0A075B6B0 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.88□□□□□ -0.35
Trav6d-7A0A075B6B0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-7A0A075B6B0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-7A0A075B6B0 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Trav6d-7A0A075B6B0 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-7A0A075B6B0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-7A0A075B6B0 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav6d-7A0A075B6B0 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-7A0A075B6B0 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-7A0A075B6B0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-7A0A075B6B0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav6d-7A0A075B6B0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms