Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav6n-5A0A075B621 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6n-5A0A075B621 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6n-5A0A075B621 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.96□□□□□ -0.33
Trav6n-5A0A075B621 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Trav6n-5A0A075B621 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6n-5A0A075B621 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav6n-5A0A075B621 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6n-5A0A075B621 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6n-5A0A075B621 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6n-5A0A075B621 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6n-5A0A075B621 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6n-5A0A075B621 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6n-5A0A075B621 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6n-5A0A075B621 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6n-5A0A075B621 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6n-5A0A075B621 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.96□□□□□ -0.34
Trav6n-5A0A075B621 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6n-5A0A075B621 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6n-5A0A075B621 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Trav6n-5A0A075B621 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6n-5A0A075B621 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-5A0A075B621 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-5A0A075B621 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav6n-5A0A075B621 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav6n-5A0A075B621 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-5A0A075B621 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-5A0A075B621 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-5A0A075B621 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-5A0A075B621 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-5A0A075B621 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-5A0A075B621 Mir6349-201ENSMUST00000184059 97 ntBASIC12.95□□□□□ -0.34
Trav6n-5A0A075B621 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav6n-5A0A075B621 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC12.95□□□□□ -0.34
Trav6n-5A0A075B621 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-5A0A075B621 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-5A0A075B621 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.95□□□□□ -0.34
Trav6n-5A0A075B621 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-5A0A075B621 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-5A0A075B621 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-5A0A075B621 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6n-5A0A075B621 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Asic1-205ENSMUST00000228185 1818 ntBASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6n-5A0A075B621 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6n-5A0A075B621 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav6n-5A0A075B621 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6n-5A0A075B621 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6n-5A0A075B621 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6n-5A0A075B621 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6n-5A0A075B621 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6n-5A0A075B621 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav6n-5A0A075B621 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav6n-5A0A075B621 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6n-5A0A075B621 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6n-5A0A075B621 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6n-5A0A075B621 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6n-5A0A075B621 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6n-5A0A075B621 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6n-5A0A075B621 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6n-5A0A075B621 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC12.93□□□□□ -0.34
Trav6n-5A0A075B621 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms