Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5-1A0A075B5Z7 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav5-1A0A075B5Z7 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.35□□□□□ -0.11
Trav5-1A0A075B5Z7 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav5-1A0A075B5Z7 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav5-1A0A075B5Z7 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5-1A0A075B5Z7 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5-1A0A075B5Z7 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5-1A0A075B5Z7 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav5-1A0A075B5Z7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5-1A0A075B5Z7 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5-1A0A075B5Z7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5-1A0A075B5Z7 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5-1A0A075B5Z7 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5-1A0A075B5Z7 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.35□□□□□ -0.11
Trav5-1A0A075B5Z7 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav5-1A0A075B5Z7 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav5-1A0A075B5Z7 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav5-1A0A075B5Z7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-1A0A075B5Z7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-1A0A075B5Z7 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-1A0A075B5Z7 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-1A0A075B5Z7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-1A0A075B5Z7 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-1A0A075B5Z7 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-1A0A075B5Z7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-1A0A075B5Z7 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-1A0A075B5Z7 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.34□□□□□ -0.11
Trav5-1A0A075B5Z7 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-1A0A075B5Z7 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-1A0A075B5Z7 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-1A0A075B5Z7 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-1A0A075B5Z7 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-1A0A075B5Z7 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-1A0A075B5Z7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav5-1A0A075B5Z7 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav5-1A0A075B5Z7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav5-1A0A075B5Z7 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav5-1A0A075B5Z7 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trav5-1A0A075B5Z7 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trav5-1A0A075B5Z7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav5-1A0A075B5Z7 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5-1A0A075B5Z7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5-1A0A075B5Z7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5-1A0A075B5Z7 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5-1A0A075B5Z7 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.33□□□□□ -0.12
Trav5-1A0A075B5Z7 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.33□□□□□ -0.12
Trav5-1A0A075B5Z7 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5-1A0A075B5Z7 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5-1A0A075B5Z7 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5-1A0A075B5Z7 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5-1A0A075B5Z7 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5-1A0A075B5Z7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5-1A0A075B5Z7 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5-1A0A075B5Z7 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5-1A0A075B5Z7 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5-1A0A075B5Z7 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5-1A0A075B5Z7 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5-1A0A075B5Z7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav5-1A0A075B5Z7 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5-1A0A075B5Z7 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5-1A0A075B5Z7 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5-1A0A075B5Z7 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Trav5-1A0A075B5Z7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5-1A0A075B5Z7 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.32□□□□□ -0.12
Trav5-1A0A075B5Z7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5-1A0A075B5Z7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5-1A0A075B5Z7 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5-1A0A075B5Z7 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.32□□□□□ -0.12
Trav5-1A0A075B5Z7 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5-1A0A075B5Z7 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5-1A0A075B5Z7 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Trav5-1A0A075B5Z7 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5-1A0A075B5Z7 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5-1A0A075B5Z7 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.32□□□□□ -0.12
Trav5-1A0A075B5Z7 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav5-1A0A075B5Z7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5-1A0A075B5Z7 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5-1A0A075B5Z7 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5-1A0A075B5Z7 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5-1A0A075B5Z7 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5-1A0A075B5Z7 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Trav5-1A0A075B5Z7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5-1A0A075B5Z7 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5-1A0A075B5Z7 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5-1A0A075B5Z7 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5-1A0A075B5Z7 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav5-1A0A075B5Z7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5-1A0A075B5Z7 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5-1A0A075B5Z7 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.31□□□□□ -0.12
Trav5-1A0A075B5Z7 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5-1A0A075B5Z7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5-1A0A075B5Z7 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5-1A0A075B5Z7 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav5-1A0A075B5Z7 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5-1A0A075B5Z7 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.31□□□□□ -0.12
Trav5-1A0A075B5Z7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav5-1A0A075B5Z7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5-1A0A075B5Z7 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5-1A0A075B5Z7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms