Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.04■□□□□ -0
H2afb3S4R1G7 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.04■□□□□ -0
H2afb3S4R1G7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H2afb3S4R1G7 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H2afb3S4R1G7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H2afb3S4R1G7 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H2afb3S4R1G7 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.04■□□□□ -0
H2afb3S4R1G7 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
H2afb3S4R1G7 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.03■□□□□ -0
H2afb3S4R1G7 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afb3S4R1G7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afb3S4R1G7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
H2afb3S4R1G7 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.03■□□□□ -0
H2afb3S4R1G7 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.03■□□□□ -0
H2afb3S4R1G7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
H2afb3S4R1G7 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afb3S4R1G7 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
H2afb3S4R1G7 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
H2afb3S4R1G7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afb3S4R1G7 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
H2afb3S4R1G7 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afb3S4R1G7 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afb3S4R1G7 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.03■□□□□ -0
H2afb3S4R1G7 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afb3S4R1G7 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
H2afb3S4R1G7 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afb3S4R1G7 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.03■□□□□ -0
H2afb3S4R1G7 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afb3S4R1G7 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afb3S4R1G7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
H2afb3S4R1G7 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.03■□□□□ -0
H2afb3S4R1G7 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afb3S4R1G7 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.03■□□□□ -0
H2afb3S4R1G7 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.03■□□□□ -0
H2afb3S4R1G7 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H2afb3S4R1G7 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H2afb3S4R1G7 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H2afb3S4R1G7 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H2afb3S4R1G7 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.02■□□□□ -0
H2afb3S4R1G7 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.02■□□□□ -0
H2afb3S4R1G7 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H2afb3S4R1G7 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H2afb3S4R1G7 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
H2afb3S4R1G7 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H2afb3S4R1G7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H2afb3S4R1G7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.02■□□□□ -0
H2afb3S4R1G7 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H2afb3S4R1G7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.02■□□□□ -0
H2afb3S4R1G7 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
H2afb3S4R1G7 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.02■□□□□ -0
H2afb3S4R1G7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
H2afb3S4R1G7 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H2afb3S4R1G7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.02■□□□□ -0
H2afb3S4R1G7 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
H2afb3S4R1G7 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
H2afb3S4R1G7 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
H2afb3S4R1G7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
H2afb3S4R1G7 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
H2afb3S4R1G7 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
H2afb3S4R1G7 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
H2afb3S4R1G7 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
H2afb3S4R1G7 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
H2afb3S4R1G7 Dancr-204ENSMUST00000132389 2347 ntBASIC15.01□□□□□ -0.01
H2afb3S4R1G7 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb3S4R1G7 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
H2afb3S4R1G7 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb3S4R1G7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb3S4R1G7 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb3S4R1G7 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb3S4R1G7 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb3S4R1G7 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb3S4R1G7 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb3S4R1G7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
H2afb3S4R1G7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb3S4R1G7 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb3S4R1G7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.01□□□□□ -0.01
H2afb3S4R1G7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb3S4R1G7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb3S4R1G7 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb3S4R1G7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb3S4R1G7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
H2afb3S4R1G7 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
H2afb3S4R1G7 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb3S4R1G7 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.01□□□□□ -0.01
H2afb3S4R1G7 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb3S4R1G7 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb3S4R1G7 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15□□□□□ -0.01
H2afb3S4R1G7 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb3S4R1G7 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb3S4R1G7 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb3S4R1G7 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb3S4R1G7 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15□□□□□ -0.01
H2afb3S4R1G7 Gm9731-201ENSMUST00000209480 747 ntBASIC15□□□□□ -0.01
H2afb3S4R1G7 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb3S4R1G7 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb3S4R1G7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15□□□□□ -0.01
H2afb3S4R1G7 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb3S4R1G7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15□□□□□ -0.01
H2afb3S4R1G7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb3S4R1G7 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms