Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn8aQ9WTU3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Scn8aQ9WTU3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn8aQ9WTU3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn8aQ9WTU3 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn8aQ9WTU3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.79■□□□□ 0.28
Scn8aQ9WTU3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn8aQ9WTU3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Scn8aQ9WTU3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn8aQ9WTU3 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.78■□□□□ 0.28
Scn8aQ9WTU3 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.78■□□□□ 0.28
Scn8aQ9WTU3 Mir3081-201ENSMUST00000175305 84 ntBASIC16.78■□□□□ 0.28
Scn8aQ9WTU3 Gm27741-201ENSMUST00000185060 237 ntBASIC16.78■□□□□ 0.28
Scn8aQ9WTU3 Gm36967-201ENSMUST00000193814 266 ntBASIC16.78■□□□□ 0.28
Scn8aQ9WTU3 Gm34391-201ENSMUST00000203706 907 ntBASIC16.78■□□□□ 0.28
Scn8aQ9WTU3 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn8aQ9WTU3 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn8aQ9WTU3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scn8aQ9WTU3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.78■□□□□ 0.28
Scn8aQ9WTU3 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Scn8aQ9WTU3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Scn8aQ9WTU3 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn8aQ9WTU3 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn8aQ9WTU3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn8aQ9WTU3 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn8aQ9WTU3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Scn8aQ9WTU3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn8aQ9WTU3 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn8aQ9WTU3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Scn8aQ9WTU3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn8aQ9WTU3 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Scn8aQ9WTU3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Scn8aQ9WTU3 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Scn8aQ9WTU3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn8aQ9WTU3 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn8aQ9WTU3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scn8aQ9WTU3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Scn8aQ9WTU3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Scn8aQ9WTU3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scn8aQ9WTU3 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Scn8aQ9WTU3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.77■□□□□ 0.27
Scn8aQ9WTU3 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scn8aQ9WTU3 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scn8aQ9WTU3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Scn8aQ9WTU3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn8aQ9WTU3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn8aQ9WTU3 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn8aQ9WTU3 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn8aQ9WTU3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn8aQ9WTU3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.76■□□□□ 0.27
Scn8aQ9WTU3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn8aQ9WTU3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn8aQ9WTU3 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn8aQ9WTU3 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scn8aQ9WTU3 Rprl3-201ENSMUST00000157400 290 ntBASIC16.76■□□□□ 0.27
Scn8aQ9WTU3 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.76■□□□□ 0.27
Scn8aQ9WTU3 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn8aQ9WTU3 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn8aQ9WTU3 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn8aQ9WTU3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn8aQ9WTU3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn8aQ9WTU3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn8aQ9WTU3 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Scn8aQ9WTU3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn8aQ9WTU3 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn8aQ9WTU3 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn8aQ9WTU3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn8aQ9WTU3 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.75■□□□□ 0.27
Scn8aQ9WTU3 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn8aQ9WTU3 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn8aQ9WTU3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.75■□□□□ 0.27
Scn8aQ9WTU3 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn8aQ9WTU3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Scn8aQ9WTU3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn8aQ9WTU3 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn8aQ9WTU3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn8aQ9WTU3 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.75■□□□□ 0.27
Scn8aQ9WTU3 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn8aQ9WTU3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn8aQ9WTU3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn8aQ9WTU3 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn8aQ9WTU3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn8aQ9WTU3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Scn8aQ9WTU3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn8aQ9WTU3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn8aQ9WTU3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn8aQ9WTU3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn8aQ9WTU3 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn8aQ9WTU3 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn8aQ9WTU3 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn8aQ9WTU3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.75■□□□□ 0.27
Scn8aQ9WTU3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn8aQ9WTU3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn8aQ9WTU3 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Scn8aQ9WTU3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Scn8aQ9WTU3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Scn8aQ9WTU3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn8aQ9WTU3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn8aQ9WTU3 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn8aQ9WTU3 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms