Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfwd2Q9R1A8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfwd2Q9R1A8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfwd2Q9R1A8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfwd2Q9R1A8 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfwd2Q9R1A8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rfwd2Q9R1A8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfwd2Q9R1A8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfwd2Q9R1A8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rfwd2Q9R1A8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.24■□□□□ 0.35
Rfwd2Q9R1A8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rfwd2Q9R1A8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.24■□□□□ 0.35
Rfwd2Q9R1A8 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.24■□□□□ 0.35
Rfwd2Q9R1A8 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfwd2Q9R1A8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rfwd2Q9R1A8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfwd2Q9R1A8 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfwd2Q9R1A8 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Rfwd2Q9R1A8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rfwd2Q9R1A8 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rfwd2Q9R1A8 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfwd2Q9R1A8 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rfwd2Q9R1A8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfwd2Q9R1A8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfwd2Q9R1A8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfwd2Q9R1A8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfwd2Q9R1A8 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfwd2Q9R1A8 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfwd2Q9R1A8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rfwd2Q9R1A8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rfwd2Q9R1A8 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfwd2Q9R1A8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfwd2Q9R1A8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.23■□□□□ 0.35
Rfwd2Q9R1A8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.23■□□□□ 0.35
Rfwd2Q9R1A8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rfwd2Q9R1A8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rfwd2Q9R1A8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.23■□□□□ 0.35
Rfwd2Q9R1A8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.23■□□□□ 0.35
Rfwd2Q9R1A8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfwd2Q9R1A8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfwd2Q9R1A8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rfwd2Q9R1A8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfwd2Q9R1A8 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfwd2Q9R1A8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfwd2Q9R1A8 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfwd2Q9R1A8 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfwd2Q9R1A8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rfwd2Q9R1A8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfwd2Q9R1A8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfwd2Q9R1A8 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfwd2Q9R1A8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfwd2Q9R1A8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfwd2Q9R1A8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Rfwd2Q9R1A8 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfwd2Q9R1A8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rfwd2Q9R1A8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfwd2Q9R1A8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfwd2Q9R1A8 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfwd2Q9R1A8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfwd2Q9R1A8 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfwd2Q9R1A8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfwd2Q9R1A8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rfwd2Q9R1A8 Gm11643-201ENSMUST00000119578 864 ntBASIC17.22■□□□□ 0.35
Rfwd2Q9R1A8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rfwd2Q9R1A8 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.22■□□□□ 0.35
Rfwd2Q9R1A8 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.22■□□□□ 0.35
Rfwd2Q9R1A8 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.22■□□□□ 0.35
Rfwd2Q9R1A8 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfwd2Q9R1A8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfwd2Q9R1A8 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rfwd2Q9R1A8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.22■□□□□ 0.35
Rfwd2Q9R1A8 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfwd2Q9R1A8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfwd2Q9R1A8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Rfwd2Q9R1A8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rfwd2Q9R1A8 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rfwd2Q9R1A8 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rfwd2Q9R1A8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfwd2Q9R1A8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Rfwd2Q9R1A8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfwd2Q9R1A8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfwd2Q9R1A8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfwd2Q9R1A8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfwd2Q9R1A8 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rfwd2Q9R1A8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfwd2Q9R1A8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfwd2Q9R1A8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rfwd2Q9R1A8 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfwd2Q9R1A8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfwd2Q9R1A8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rfwd2Q9R1A8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rfwd2Q9R1A8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfwd2Q9R1A8 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Rfwd2Q9R1A8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.21■□□□□ 0.35
Rfwd2Q9R1A8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfwd2Q9R1A8 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfwd2Q9R1A8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.21■□□□□ 0.35
Rfwd2Q9R1A8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfwd2Q9R1A8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfwd2Q9R1A8 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms