Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn2Q9R0A1 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn2Q9R0A1 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn2Q9R0A1 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn2Q9R0A1 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn2Q9R0A1 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn2Q9R0A1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Clcn2Q9R0A1 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn2Q9R0A1 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn2Q9R0A1 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Clcn2Q9R0A1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn2Q9R0A1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn2Q9R0A1 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn2Q9R0A1 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Clcn2Q9R0A1 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Clcn2Q9R0A1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn2Q9R0A1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn2Q9R0A1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn2Q9R0A1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Clcn2Q9R0A1 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn2Q9R0A1 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.09■□□□□ 0.33
Clcn2Q9R0A1 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn2Q9R0A1 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn2Q9R0A1 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn2Q9R0A1 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn2Q9R0A1 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn2Q9R0A1 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.09■□□□□ 0.33
Clcn2Q9R0A1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn2Q9R0A1 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clcn2Q9R0A1 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clcn2Q9R0A1 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clcn2Q9R0A1 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clcn2Q9R0A1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Clcn2Q9R0A1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Clcn2Q9R0A1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.08■□□□□ 0.32
Clcn2Q9R0A1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.08■□□□□ 0.32
Clcn2Q9R0A1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn2Q9R0A1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.08■□□□□ 0.32
Clcn2Q9R0A1 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn2Q9R0A1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn2Q9R0A1 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn2Q9R0A1 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn2Q9R0A1 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn2Q9R0A1 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn2Q9R0A1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn2Q9R0A1 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn2Q9R0A1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn2Q9R0A1 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn2Q9R0A1 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Clcn2Q9R0A1 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn2Q9R0A1 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn2Q9R0A1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn2Q9R0A1 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn2Q9R0A1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn2Q9R0A1 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Clcn2Q9R0A1 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.07■□□□□ 0.32
Clcn2Q9R0A1 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn2Q9R0A1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn2Q9R0A1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Clcn2Q9R0A1 Gm5417-201ENSMUST00000079706 384 ntBASIC17.07■□□□□ 0.32
Clcn2Q9R0A1 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn2Q9R0A1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn2Q9R0A1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn2Q9R0A1 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn2Q9R0A1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Clcn2Q9R0A1 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn2Q9R0A1 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn2Q9R0A1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn2Q9R0A1 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn2Q9R0A1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn2Q9R0A1 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn2Q9R0A1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn2Q9R0A1 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn2Q9R0A1 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn2Q9R0A1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn2Q9R0A1 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.06■□□□□ 0.32
Clcn2Q9R0A1 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
Clcn2Q9R0A1 Gm15565-201ENSMUST00000118890 427 ntBASIC17.06■□□□□ 0.32
Clcn2Q9R0A1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Clcn2Q9R0A1 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.06■□□□□ 0.32
Clcn2Q9R0A1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn2Q9R0A1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.06■□□□□ 0.32
Clcn2Q9R0A1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.06■□□□□ 0.32
Clcn2Q9R0A1 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.06■□□□□ 0.32
Clcn2Q9R0A1 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn2Q9R0A1 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn2Q9R0A1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Clcn2Q9R0A1 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn2Q9R0A1 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn2Q9R0A1 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn2Q9R0A1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn2Q9R0A1 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn2Q9R0A1 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Clcn2Q9R0A1 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn2Q9R0A1 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn2Q9R0A1 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn2Q9R0A1 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn2Q9R0A1 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn2Q9R0A1 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn2Q9R0A1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms