Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Scn11aQ9R053 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn11aQ9R053 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scn11aQ9R053 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC19.78■□□□□ 0.76
Scn11aQ9R053 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn11aQ9R053 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Scn11aQ9R053 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scn11aQ9R053 Gm10576-201ENSMUST00000191927 825 ntBASIC19.78■□□□□ 0.76
Scn11aQ9R053 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.78■□□□□ 0.76
Scn11aQ9R053 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn11aQ9R053 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Scn11aQ9R053 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Scn11aQ9R053 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn11aQ9R053 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Scn11aQ9R053 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Scn11aQ9R053 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Scn11aQ9R053 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn11aQ9R053 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Scn11aQ9R053 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.77■□□□□ 0.76
Scn11aQ9R053 Mir5126-201ENSMUST00000175513 77 ntBASIC19.77■□□□□ 0.76
Scn11aQ9R053 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.77■□□□□ 0.76
Scn11aQ9R053 Gm2213-201ENSMUST00000197485 688 ntBASIC19.77■□□□□ 0.76
Scn11aQ9R053 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn11aQ9R053 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Scn11aQ9R053 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.76
Scn11aQ9R053 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Scn11aQ9R053 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scn11aQ9R053 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scn11aQ9R053 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.76■□□□□ 0.75
Scn11aQ9R053 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn11aQ9R053 AC131586.3-201ENSMUST00000228355 1367 ntBASIC19.76■□□□□ 0.75
Scn11aQ9R053 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn11aQ9R053 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scn11aQ9R053 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC19.76■□□□□ 0.75
Scn11aQ9R053 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.76■□□□□ 0.75
Scn11aQ9R053 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn11aQ9R053 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scn11aQ9R053 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.76■□□□□ 0.75
Scn11aQ9R053 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Scn11aQ9R053 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn11aQ9R053 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scn11aQ9R053 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.76■□□□□ 0.75
Scn11aQ9R053 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn11aQ9R053 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scn11aQ9R053 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Scn11aQ9R053 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Scn11aQ9R053 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn11aQ9R053 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC19.75■□□□□ 0.75
Scn11aQ9R053 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC19.75■□□□□ 0.75
Scn11aQ9R053 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.75■□□□□ 0.75
Scn11aQ9R053 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn11aQ9R053 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn11aQ9R053 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn11aQ9R053 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn11aQ9R053 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn11aQ9R053 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn11aQ9R053 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn11aQ9R053 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scn11aQ9R053 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Scn11aQ9R053 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn11aQ9R053 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn11aQ9R053 Auts2-212ENSMUST00000178555 309 ntBASIC19.75■□□□□ 0.75
Scn11aQ9R053 Gm43332-201ENSMUST00000202511 1044 ntBASIC19.75■□□□□ 0.75
Scn11aQ9R053 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Scn11aQ9R053 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn11aQ9R053 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Scn11aQ9R053 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn11aQ9R053 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.74■□□□□ 0.75
Scn11aQ9R053 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn11aQ9R053 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn11aQ9R053 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Scn11aQ9R053 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.74■□□□□ 0.75
Scn11aQ9R053 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Scn11aQ9R053 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn11aQ9R053 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn11aQ9R053 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Scn11aQ9R053 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Scn11aQ9R053 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.73■□□□□ 0.75
Scn11aQ9R053 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.73■□□□□ 0.75
Scn11aQ9R053 Gm7506-201ENSMUST00000207758 815 ntBASIC19.73■□□□□ 0.75
Scn11aQ9R053 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.73■□□□□ 0.75
Scn11aQ9R053 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn11aQ9R053 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Scn11aQ9R053 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Scn11aQ9R053 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn11aQ9R053 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn11aQ9R053 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn11aQ9R053 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn11aQ9R053 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn11aQ9R053 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn11aQ9R053 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn11aQ9R053 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn11aQ9R053 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn11aQ9R053 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn11aQ9R053 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn11aQ9R053 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn11aQ9R053 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
Scn11aQ9R053 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scn11aQ9R053 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn11aQ9R053 Mir5131-201ENSMUST00000175426 93 ntBASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms