Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Crlf1Q9JM58 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.41□□□□□ -0.26
Crlf1Q9JM58 Mir8112-201ENSMUST00000184382 131 ntBASIC13.41□□□□□ -0.26
Crlf1Q9JM58 Gm44450-201ENSMUST00000199528 114 ntBASIC13.41□□□□□ -0.26
Crlf1Q9JM58 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Crlf1Q9JM58 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Crlf1Q9JM58 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.41□□□□□ -0.26
Crlf1Q9JM58 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Crlf1Q9JM58 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Crlf1Q9JM58 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Crlf1Q9JM58 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Crlf1Q9JM58 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Crlf1Q9JM58 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Crlf1Q9JM58 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Crlf1Q9JM58 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Crlf1Q9JM58 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Crlf1Q9JM58 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
Crlf1Q9JM58 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Crlf1Q9JM58 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Crlf1Q9JM58 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Crlf1Q9JM58 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Crlf1Q9JM58 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Crlf1Q9JM58 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Crlf1Q9JM58 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Crlf1Q9JM58 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC13.4□□□□□ -0.26
Crlf1Q9JM58 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Crlf1Q9JM58 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Crlf1Q9JM58 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Crlf1Q9JM58 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Crlf1Q9JM58 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.4□□□□□ -0.26
Crlf1Q9JM58 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Crlf1Q9JM58 Gm18421-201ENSMUST00000204122 625 ntBASIC13.4□□□□□ -0.26
Crlf1Q9JM58 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.4□□□□□ -0.26
Crlf1Q9JM58 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Crlf1Q9JM58 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Crlf1Q9JM58 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Crlf1Q9JM58 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Crlf1Q9JM58 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Crlf1Q9JM58 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Crlf1Q9JM58 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Crlf1Q9JM58 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Crlf1Q9JM58 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crlf1Q9JM58 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crlf1Q9JM58 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.39□□□□□ -0.27
Crlf1Q9JM58 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Crlf1Q9JM58 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crlf1Q9JM58 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crlf1Q9JM58 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crlf1Q9JM58 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crlf1Q9JM58 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crlf1Q9JM58 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crlf1Q9JM58 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Crlf1Q9JM58 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crlf1Q9JM58 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crlf1Q9JM58 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Crlf1Q9JM58 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC13.39□□□□□ -0.27
Crlf1Q9JM58 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crlf1Q9JM58 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crlf1Q9JM58 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crlf1Q9JM58 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Crlf1Q9JM58 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crlf1Q9JM58 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crlf1Q9JM58 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Crlf1Q9JM58 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf1Q9JM58 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf1Q9JM58 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf1Q9JM58 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf1Q9JM58 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf1Q9JM58 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
Crlf1Q9JM58 Gm44430-201ENSMUST00000203376 995 ntBASIC13.38□□□□□ -0.27
Crlf1Q9JM58 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.38□□□□□ -0.27
Crlf1Q9JM58 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.38□□□□□ -0.27
Crlf1Q9JM58 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf1Q9JM58 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf1Q9JM58 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.38□□□□□ -0.27
Crlf1Q9JM58 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf1Q9JM58 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf1Q9JM58 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Crlf1Q9JM58 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf1Q9JM58 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Crlf1Q9JM58 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf1Q9JM58 BC021767-201ENSMUST00000126387 1716 ntBASIC13.38□□□□□ -0.27
Crlf1Q9JM58 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf1Q9JM58 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf1Q9JM58 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf1Q9JM58 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.38□□□□□ -0.27
Crlf1Q9JM58 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf1Q9JM58 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Crlf1Q9JM58 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf1Q9JM58 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crlf1Q9JM58 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crlf1Q9JM58 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crlf1Q9JM58 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC13.37□□□□□ -0.27
Crlf1Q9JM58 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Crlf1Q9JM58 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Crlf1Q9JM58 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crlf1Q9JM58 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crlf1Q9JM58 Gm25745-201ENSMUST00000174945 133 ntBASIC13.37□□□□□ -0.27
Crlf1Q9JM58 Gm6550-201ENSMUST00000187574 993 ntBASIC13.37□□□□□ -0.27
Crlf1Q9JM58 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms