Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Col4a3bpQ9EQG9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.18■□□□□ 0.66
Col4a3bpQ9EQG9 Il3ra-202ENSMUST00000223589 738 ntBASIC19.18■□□□□ 0.66
Col4a3bpQ9EQG9 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a3bpQ9EQG9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a3bpQ9EQG9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a3bpQ9EQG9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a3bpQ9EQG9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a3bpQ9EQG9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a3bpQ9EQG9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a3bpQ9EQG9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a3bpQ9EQG9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Col4a3bpQ9EQG9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a3bpQ9EQG9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a3bpQ9EQG9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a3bpQ9EQG9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Col4a3bpQ9EQG9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Col4a3bpQ9EQG9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a3bpQ9EQG9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a3bpQ9EQG9 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.17■□□□□ 0.66
Col4a3bpQ9EQG9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a3bpQ9EQG9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a3bpQ9EQG9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a3bpQ9EQG9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a3bpQ9EQG9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a3bpQ9EQG9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
Col4a3bpQ9EQG9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a3bpQ9EQG9 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.17■□□□□ 0.66
Col4a3bpQ9EQG9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a3bpQ9EQG9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a3bpQ9EQG9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a3bpQ9EQG9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a3bpQ9EQG9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a3bpQ9EQG9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.17■□□□□ 0.66
Col4a3bpQ9EQG9 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.17■□□□□ 0.66
Col4a3bpQ9EQG9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.17■□□□□ 0.66
Col4a3bpQ9EQG9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a3bpQ9EQG9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a3bpQ9EQG9 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a3bpQ9EQG9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Col4a3bpQ9EQG9 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a3bpQ9EQG9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Col4a3bpQ9EQG9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a3bpQ9EQG9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.16■□□□□ 0.66
Col4a3bpQ9EQG9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Col4a3bpQ9EQG9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a3bpQ9EQG9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a3bpQ9EQG9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a3bpQ9EQG9 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Col4a3bpQ9EQG9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a3bpQ9EQG9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.16■□□□□ 0.66
Col4a3bpQ9EQG9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a3bpQ9EQG9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a3bpQ9EQG9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a3bpQ9EQG9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a3bpQ9EQG9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a3bpQ9EQG9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a3bpQ9EQG9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a3bpQ9EQG9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Col4a3bpQ9EQG9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a3bpQ9EQG9 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a3bpQ9EQG9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.15■□□□□ 0.66
Col4a3bpQ9EQG9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.15■□□□□ 0.66
Col4a3bpQ9EQG9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a3bpQ9EQG9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a3bpQ9EQG9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a3bpQ9EQG9 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a3bpQ9EQG9 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a3bpQ9EQG9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a3bpQ9EQG9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a3bpQ9EQG9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a3bpQ9EQG9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a3bpQ9EQG9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Col4a3bpQ9EQG9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Col4a3bpQ9EQG9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Col4a3bpQ9EQG9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col4a3bpQ9EQG9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col4a3bpQ9EQG9 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Col4a3bpQ9EQG9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col4a3bpQ9EQG9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col4a3bpQ9EQG9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Col4a3bpQ9EQG9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col4a3bpQ9EQG9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col4a3bpQ9EQG9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.14■□□□□ 0.65
Col4a3bpQ9EQG9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col4a3bpQ9EQG9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Col4a3bpQ9EQG9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.14■□□□□ 0.65
Col4a3bpQ9EQG9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col4a3bpQ9EQG9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col4a3bpQ9EQG9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col4a3bpQ9EQG9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Col4a3bpQ9EQG9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col4a3bpQ9EQG9 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col4a3bpQ9EQG9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col4a3bpQ9EQG9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col4a3bpQ9EQG9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col4a3bpQ9EQG9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col4a3bpQ9EQG9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Col4a3bpQ9EQG9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col4a3bpQ9EQG9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms