Protein–RNA interactions for Protein: Q9D9M9

Rnf138rt1, RIKEN cDNA 1700045I19, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138rt1Q9D9M9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf138rt1Q9D9M9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf138rt1Q9D9M9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf138rt1Q9D9M9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf138rt1Q9D9M9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf138rt1Q9D9M9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rnf138rt1Q9D9M9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf138rt1Q9D9M9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf138rt1Q9D9M9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rnf138rt1Q9D9M9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf138rt1Q9D9M9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.56■□□□□ 0.4
Rnf138rt1Q9D9M9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rnf138rt1Q9D9M9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rnf138rt1Q9D9M9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Rnf138rt1Q9D9M9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf138rt1Q9D9M9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf138rt1Q9D9M9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Rnf138rt1Q9D9M9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf138rt1Q9D9M9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.55■□□□□ 0.4
Rnf138rt1Q9D9M9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.55■□□□□ 0.4
Rnf138rt1Q9D9M9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf138rt1Q9D9M9 Gm17808-201ENSMUST00000200859 894 ntBASIC17.55■□□□□ 0.4
Rnf138rt1Q9D9M9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Rnf138rt1Q9D9M9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf138rt1Q9D9M9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf138rt1Q9D9M9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf138rt1Q9D9M9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf138rt1Q9D9M9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf138rt1Q9D9M9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf138rt1Q9D9M9 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf138rt1Q9D9M9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf138rt1Q9D9M9 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Rnf138rt1Q9D9M9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf138rt1Q9D9M9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.54■□□□□ 0.4
Rnf138rt1Q9D9M9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf138rt1Q9D9M9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf138rt1Q9D9M9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf138rt1Q9D9M9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf138rt1Q9D9M9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.54■□□□□ 0.4
Rnf138rt1Q9D9M9 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf138rt1Q9D9M9 Gm6623-201ENSMUST00000173570 544 ntBASIC17.54■□□□□ 0.4
Rnf138rt1Q9D9M9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf138rt1Q9D9M9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.54■□□□□ 0.4
Rnf138rt1Q9D9M9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf138rt1Q9D9M9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf138rt1Q9D9M9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf138rt1Q9D9M9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf138rt1Q9D9M9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf138rt1Q9D9M9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf138rt1Q9D9M9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Rnf138rt1Q9D9M9 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf138rt1Q9D9M9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf138rt1Q9D9M9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.54■□□□□ 0.4
Rnf138rt1Q9D9M9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf138rt1Q9D9M9 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf138rt1Q9D9M9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf138rt1Q9D9M9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf138rt1Q9D9M9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf138rt1Q9D9M9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf138rt1Q9D9M9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf138rt1Q9D9M9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf138rt1Q9D9M9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rnf138rt1Q9D9M9 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rnf138rt1Q9D9M9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.53■□□□□ 0.4
Rnf138rt1Q9D9M9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf138rt1Q9D9M9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf138rt1Q9D9M9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf138rt1Q9D9M9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Rnf138rt1Q9D9M9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf138rt1Q9D9M9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rnf138rt1Q9D9M9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf138rt1Q9D9M9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf138rt1Q9D9M9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf138rt1Q9D9M9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf138rt1Q9D9M9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf138rt1Q9D9M9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf138rt1Q9D9M9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf138rt1Q9D9M9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rnf138rt1Q9D9M9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf138rt1Q9D9M9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.52■□□□□ 0.4
Rnf138rt1Q9D9M9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf138rt1Q9D9M9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf138rt1Q9D9M9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf138rt1Q9D9M9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Rnf138rt1Q9D9M9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf138rt1Q9D9M9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf138rt1Q9D9M9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf138rt1Q9D9M9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Rnf138rt1Q9D9M9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.52■□□□□ 0.4
Rnf138rt1Q9D9M9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf138rt1Q9D9M9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf138rt1Q9D9M9 Gm45328-201ENSMUST00000210942 917 ntBASIC17.52■□□□□ 0.4
Rnf138rt1Q9D9M9 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf138rt1Q9D9M9 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.52■□□□□ 0.4
Rnf138rt1Q9D9M9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Rnf138rt1Q9D9M9 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf138rt1Q9D9M9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf138rt1Q9D9M9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf138rt1Q9D9M9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf138rt1Q9D9M9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms