Protein–RNA interactions for Protein: Q9D6T1

Tube1, Tubulin epsilon chain, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tube1Q9D6T1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Tube1Q9D6T1 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.58■□□□□ 0.56
Tube1Q9D6T1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Tube1Q9D6T1 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tube1Q9D6T1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Tube1Q9D6T1 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tube1Q9D6T1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tube1Q9D6T1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tube1Q9D6T1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tube1Q9D6T1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tube1Q9D6T1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tube1Q9D6T1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Tube1Q9D6T1 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tube1Q9D6T1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Tube1Q9D6T1 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Tube1Q9D6T1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.57■□□□□ 0.56
Tube1Q9D6T1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Tube1Q9D6T1 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tube1Q9D6T1 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tube1Q9D6T1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tube1Q9D6T1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tube1Q9D6T1 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tube1Q9D6T1 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Tube1Q9D6T1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tube1Q9D6T1 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tube1Q9D6T1 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Tube1Q9D6T1 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tube1Q9D6T1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tube1Q9D6T1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Tube1Q9D6T1 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.56■□□□□ 0.56
Tube1Q9D6T1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tube1Q9D6T1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tube1Q9D6T1 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tube1Q9D6T1 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Tube1Q9D6T1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.56■□□□□ 0.56
Tube1Q9D6T1 Gm5587-201ENSMUST00000206270 674 ntBASIC18.56■□□□□ 0.56
Tube1Q9D6T1 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tube1Q9D6T1 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tube1Q9D6T1 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tube1Q9D6T1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tube1Q9D6T1 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tube1Q9D6T1 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tube1Q9D6T1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tube1Q9D6T1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tube1Q9D6T1 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tube1Q9D6T1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tube1Q9D6T1 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tube1Q9D6T1 Dancr-204ENSMUST00000132389 2347 ntBASIC18.55■□□□□ 0.56
Tube1Q9D6T1 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Tube1Q9D6T1 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tube1Q9D6T1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tube1Q9D6T1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tube1Q9D6T1 Gm7284-201ENSMUST00000131667 944 ntBASIC18.55■□□□□ 0.56
Tube1Q9D6T1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tube1Q9D6T1 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tube1Q9D6T1 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.55■□□□□ 0.56
Tube1Q9D6T1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tube1Q9D6T1 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tube1Q9D6T1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tube1Q9D6T1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tube1Q9D6T1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tube1Q9D6T1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Tube1Q9D6T1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Tube1Q9D6T1 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tube1Q9D6T1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tube1Q9D6T1 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tube1Q9D6T1 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.54■□□□□ 0.56
Tube1Q9D6T1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tube1Q9D6T1 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tube1Q9D6T1 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tube1Q9D6T1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.54■□□□□ 0.56
Tube1Q9D6T1 Gm9013-201ENSMUST00000132939 882 ntBASIC18.54■□□□□ 0.56
Tube1Q9D6T1 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.54■□□□□ 0.56
Tube1Q9D6T1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Tube1Q9D6T1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Tube1Q9D6T1 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.54■□□□□ 0.56
Tube1Q9D6T1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tube1Q9D6T1 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.54■□□□□ 0.56
Tube1Q9D6T1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tube1Q9D6T1 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tube1Q9D6T1 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tube1Q9D6T1 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Tube1Q9D6T1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tube1Q9D6T1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Tube1Q9D6T1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tube1Q9D6T1 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tube1Q9D6T1 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tube1Q9D6T1 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tube1Q9D6T1 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tube1Q9D6T1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tube1Q9D6T1 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.53■□□□□ 0.56
Tube1Q9D6T1 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tube1Q9D6T1 Gm10566-201ENSMUST00000086739 996 ntBASIC18.53■□□□□ 0.56
Tube1Q9D6T1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tube1Q9D6T1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tube1Q9D6T1 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tube1Q9D6T1 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tube1Q9D6T1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Tube1Q9D6T1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tube1Q9D6T1 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms