Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc7Q9D541 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc7Q9D541 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ccdc7Q9D541 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc7Q9D541 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc7Q9D541 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc7Q9D541 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc7Q9D541 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc7Q9D541 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Ccdc7Q9D541 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc7Q9D541 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.55■□□□□ 0.72
Ccdc7Q9D541 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.55■□□□□ 0.72
Ccdc7Q9D541 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
Ccdc7Q9D541 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Ccdc7Q9D541 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.55■□□□□ 0.72
Ccdc7Q9D541 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc7Q9D541 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc7Q9D541 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Ccdc7Q9D541 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc7Q9D541 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc7Q9D541 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc7Q9D541 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc7Q9D541 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc7Q9D541 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc7Q9D541 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc7Q9D541 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ccdc7Q9D541 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc7Q9D541 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc7Q9D541 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc7Q9D541 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc7Q9D541 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
Ccdc7Q9D541 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
Ccdc7Q9D541 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc7Q9D541 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.54■□□□□ 0.72
Ccdc7Q9D541 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc7Q9D541 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Ccdc7Q9D541 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc7Q9D541 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc7Q9D541 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Ccdc7Q9D541 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc7Q9D541 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc7Q9D541 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc7Q9D541 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc7Q9D541 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Ccdc7Q9D541 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc7Q9D541 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc7Q9D541 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc7Q9D541 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc7Q9D541 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.53■□□□□ 0.72
Ccdc7Q9D541 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc7Q9D541 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc7Q9D541 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc7Q9D541 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc7Q9D541 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.53■□□□□ 0.72
Ccdc7Q9D541 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.53■□□□□ 0.72
Ccdc7Q9D541 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc7Q9D541 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc7Q9D541 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc7Q9D541 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc7Q9D541 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc7Q9D541 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc7Q9D541 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc7Q9D541 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.53■□□□□ 0.72
Ccdc7Q9D541 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc7Q9D541 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc7Q9D541 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Ccdc7Q9D541 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc7Q9D541 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.52■□□□□ 0.72
Ccdc7Q9D541 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.52■□□□□ 0.72
Ccdc7Q9D541 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Ccdc7Q9D541 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc7Q9D541 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Ccdc7Q9D541 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Ccdc7Q9D541 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.52■□□□□ 0.71
Ccdc7Q9D541 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ccdc7Q9D541 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ccdc7Q9D541 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ccdc7Q9D541 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.51■□□□□ 0.71
Ccdc7Q9D541 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Ccdc7Q9D541 Actl10-202ENSMUST00000226583 1501 ntBASIC19.51■□□□□ 0.71
Ccdc7Q9D541 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc7Q9D541 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc7Q9D541 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc7Q9D541 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.51■□□□□ 0.71
Ccdc7Q9D541 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc7Q9D541 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.51■□□□□ 0.71
Ccdc7Q9D541 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.51■□□□□ 0.71
Ccdc7Q9D541 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc7Q9D541 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc7Q9D541 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc7Q9D541 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc7Q9D541 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc7Q9D541 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc7Q9D541 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc7Q9D541 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc7Q9D541 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc7Q9D541 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc7Q9D541 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC19.5■□□□□ 0.71
Ccdc7Q9D541 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc7Q9D541 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms