Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Stag1Q9D3E6 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Stag1Q9D3E6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Stag1Q9D3E6 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Stag1Q9D3E6 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Stag1Q9D3E6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Stag1Q9D3E6 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Stag1Q9D3E6 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Stag1Q9D3E6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Stag1Q9D3E6 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Stag1Q9D3E6 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Stag1Q9D3E6 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Stag1Q9D3E6 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.88■□□□□ 0.77
Stag1Q9D3E6 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Stag1Q9D3E6 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Stag1Q9D3E6 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Stag1Q9D3E6 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Stag1Q9D3E6 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.87■□□□□ 0.77
Stag1Q9D3E6 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Stag1Q9D3E6 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.87■□□□□ 0.77
Stag1Q9D3E6 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Stag1Q9D3E6 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Stag1Q9D3E6 Gm43347-201ENSMUST00000200226 580 ntBASIC19.87■□□□□ 0.77
Stag1Q9D3E6 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.87■□□□□ 0.77
Stag1Q9D3E6 Mzt1-203ENSMUST00000227948 952 ntBASIC19.87■□□□□ 0.77
Stag1Q9D3E6 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Stag1Q9D3E6 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Stag1Q9D3E6 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Stag1Q9D3E6 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Stag1Q9D3E6 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Stag1Q9D3E6 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.87■□□□□ 0.77
Stag1Q9D3E6 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Stag1Q9D3E6 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Stag1Q9D3E6 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Stag1Q9D3E6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Stag1Q9D3E6 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.86■□□□□ 0.77
Stag1Q9D3E6 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Stag1Q9D3E6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Stag1Q9D3E6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Stag1Q9D3E6 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Stag1Q9D3E6 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Stag1Q9D3E6 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Stag1Q9D3E6 Gm15372-201ENSMUST00000120729 834 ntBASIC19.86■□□□□ 0.77
Stag1Q9D3E6 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.86■□□□□ 0.77
Stag1Q9D3E6 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.86■□□□□ 0.77
Stag1Q9D3E6 Gm28659-201ENSMUST00000188013 759 ntBASIC19.86■□□□□ 0.77
Stag1Q9D3E6 Gm44771-201ENSMUST00000206975 626 ntBASIC19.86■□□□□ 0.77
Stag1Q9D3E6 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Stag1Q9D3E6 AC164629.2-201ENSMUST00000217916 270 ntBASIC19.86■□□□□ 0.77
Stag1Q9D3E6 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Stag1Q9D3E6 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.86■□□□□ 0.77
Stag1Q9D3E6 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Stag1Q9D3E6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Stag1Q9D3E6 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Stag1Q9D3E6 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Stag1Q9D3E6 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Stag1Q9D3E6 Gm5864-201ENSMUST00000202263 970 ntBASIC19.85■□□□□ 0.77
Stag1Q9D3E6 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Stag1Q9D3E6 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Stag1Q9D3E6 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Stag1Q9D3E6 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Stag1Q9D3E6 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Stag1Q9D3E6 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Stag1Q9D3E6 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Stag1Q9D3E6 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.85■□□□□ 0.77
Stag1Q9D3E6 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.85■□□□□ 0.77
Stag1Q9D3E6 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.84■□□□□ 0.77
Stag1Q9D3E6 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.84■□□□□ 0.77
Stag1Q9D3E6 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Stag1Q9D3E6 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.84■□□□□ 0.77
Stag1Q9D3E6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.84■□□□□ 0.77
Stag1Q9D3E6 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Stag1Q9D3E6 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Stag1Q9D3E6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Stag1Q9D3E6 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Stag1Q9D3E6 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Stag1Q9D3E6 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Stag1Q9D3E6 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Stag1Q9D3E6 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Stag1Q9D3E6 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Stag1Q9D3E6 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Stag1Q9D3E6 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.83■□□□□ 0.77
Stag1Q9D3E6 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.83■□□□□ 0.77
Stag1Q9D3E6 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.83■□□□□ 0.77
Stag1Q9D3E6 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.83■□□□□ 0.77
Stag1Q9D3E6 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Stag1Q9D3E6 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.83■□□□□ 0.77
Stag1Q9D3E6 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Stag1Q9D3E6 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Stag1Q9D3E6 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Stag1Q9D3E6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Stag1Q9D3E6 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Stag1Q9D3E6 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Stag1Q9D3E6 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Stag1Q9D3E6 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Stag1Q9D3E6 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
Stag1Q9D3E6 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Stag1Q9D3E6 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Stag1Q9D3E6 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Stag1Q9D3E6 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms