Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc3Q9CW03 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc3Q9CW03 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smc3Q9CW03 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.67■□□□□ 0.74
Smc3Q9CW03 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc3Q9CW03 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc3Q9CW03 Gm7638-201ENSMUST00000121348 967 ntBASIC19.67■□□□□ 0.74
Smc3Q9CW03 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smc3Q9CW03 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smc3Q9CW03 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.67■□□□□ 0.74
Smc3Q9CW03 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc3Q9CW03 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Smc3Q9CW03 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc3Q9CW03 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc3Q9CW03 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc3Q9CW03 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smc3Q9CW03 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.67■□□□□ 0.74
Smc3Q9CW03 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc3Q9CW03 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc3Q9CW03 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc3Q9CW03 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Smc3Q9CW03 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.67■□□□□ 0.74
Smc3Q9CW03 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc3Q9CW03 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.66■□□□□ 0.74
Smc3Q9CW03 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc3Q9CW03 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc3Q9CW03 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc3Q9CW03 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smc3Q9CW03 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc3Q9CW03 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc3Q9CW03 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc3Q9CW03 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc3Q9CW03 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc3Q9CW03 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc3Q9CW03 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.66■□□□□ 0.74
Smc3Q9CW03 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc3Q9CW03 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.66■□□□□ 0.74
Smc3Q9CW03 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc3Q9CW03 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Smc3Q9CW03 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc3Q9CW03 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.66■□□□□ 0.74
Smc3Q9CW03 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc3Q9CW03 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Smc3Q9CW03 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Smc3Q9CW03 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Smc3Q9CW03 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc3Q9CW03 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc3Q9CW03 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc3Q9CW03 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc3Q9CW03 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Smc3Q9CW03 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Smc3Q9CW03 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc3Q9CW03 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc3Q9CW03 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.65■□□□□ 0.74
Smc3Q9CW03 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc3Q9CW03 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc3Q9CW03 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc3Q9CW03 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Smc3Q9CW03 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Smc3Q9CW03 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc3Q9CW03 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Smc3Q9CW03 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc3Q9CW03 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc3Q9CW03 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc3Q9CW03 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smc3Q9CW03 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.74
Smc3Q9CW03 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smc3Q9CW03 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smc3Q9CW03 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smc3Q9CW03 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smc3Q9CW03 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smc3Q9CW03 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smc3Q9CW03 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smc3Q9CW03 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smc3Q9CW03 Gm38027-201ENSMUST00000192315 235 ntBASIC19.64■□□□□ 0.73
Smc3Q9CW03 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.64■□□□□ 0.73
Smc3Q9CW03 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.64■□□□□ 0.73
Smc3Q9CW03 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Smc3Q9CW03 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smc3Q9CW03 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smc3Q9CW03 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smc3Q9CW03 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smc3Q9CW03 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smc3Q9CW03 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Smc3Q9CW03 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smc3Q9CW03 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smc3Q9CW03 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc3Q9CW03 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Smc3Q9CW03 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc3Q9CW03 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Smc3Q9CW03 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc3Q9CW03 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc3Q9CW03 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc3Q9CW03 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Smc3Q9CW03 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Smc3Q9CW03 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Smc3Q9CW03 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc3Q9CW03 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.63■□□□□ 0.73
Smc3Q9CW03 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.63■□□□□ 0.73
Smc3Q9CW03 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms