Protein–RNA interactions for Protein: Q9CR78

Msantd3, Myb/SANT-like DNA-binding domain-containing protein 3, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msantd3Q9CR78 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.06■□□□□ 0.16
Msantd3Q9CR78 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Msantd3Q9CR78 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Msantd3Q9CR78 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Msantd3Q9CR78 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.06■□□□□ 0.16
Msantd3Q9CR78 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Msantd3Q9CR78 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Msantd3Q9CR78 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Msantd3Q9CR78 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Msantd3Q9CR78 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msantd3Q9CR78 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Msantd3Q9CR78 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msantd3Q9CR78 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msantd3Q9CR78 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msantd3Q9CR78 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Msantd3Q9CR78 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.05■□□□□ 0.16
Msantd3Q9CR78 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msantd3Q9CR78 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Msantd3Q9CR78 Gm13186-201ENSMUST00000118031 316 ntBASIC16.05■□□□□ 0.16
Msantd3Q9CR78 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Msantd3Q9CR78 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.05■□□□□ 0.16
Msantd3Q9CR78 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
Msantd3Q9CR78 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Msantd3Q9CR78 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.05■□□□□ 0.16
Msantd3Q9CR78 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Msantd3Q9CR78 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.05■□□□□ 0.16
Msantd3Q9CR78 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.05■□□□□ 0.16
Msantd3Q9CR78 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msantd3Q9CR78 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msantd3Q9CR78 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msantd3Q9CR78 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msantd3Q9CR78 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msantd3Q9CR78 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msantd3Q9CR78 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.05■□□□□ 0.16
Msantd3Q9CR78 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Msantd3Q9CR78 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msantd3Q9CR78 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Msantd3Q9CR78 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Msantd3Q9CR78 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Msantd3Q9CR78 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msantd3Q9CR78 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Msantd3Q9CR78 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.04■□□□□ 0.16
Msantd3Q9CR78 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Msantd3Q9CR78 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msantd3Q9CR78 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msantd3Q9CR78 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msantd3Q9CR78 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msantd3Q9CR78 Gm15372-201ENSMUST00000120729 834 ntBASIC16.04■□□□□ 0.16
Msantd3Q9CR78 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Msantd3Q9CR78 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Msantd3Q9CR78 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Msantd3Q9CR78 Mir8098-201ENSMUST00000184011 137 ntBASIC16.04■□□□□ 0.16
Msantd3Q9CR78 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Msantd3Q9CR78 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Msantd3Q9CR78 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msantd3Q9CR78 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msantd3Q9CR78 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msantd3Q9CR78 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msantd3Q9CR78 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msantd3Q9CR78 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msantd3Q9CR78 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Msantd3Q9CR78 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msantd3Q9CR78 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msantd3Q9CR78 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msantd3Q9CR78 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msantd3Q9CR78 Gm27459-201ENSMUST00000184860 107 ntBASIC16.03■□□□□ 0.16
Msantd3Q9CR78 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.03■□□□□ 0.16
Msantd3Q9CR78 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Msantd3Q9CR78 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.03■□□□□ 0.16
Msantd3Q9CR78 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msantd3Q9CR78 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msantd3Q9CR78 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msantd3Q9CR78 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msantd3Q9CR78 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msantd3Q9CR78 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msantd3Q9CR78 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msantd3Q9CR78 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msantd3Q9CR78 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Msantd3Q9CR78 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Msantd3Q9CR78 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Msantd3Q9CR78 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Msantd3Q9CR78 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Msantd3Q9CR78 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Msantd3Q9CR78 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Msantd3Q9CR78 Gm12895-201ENSMUST00000122214 226 ntBASIC16.02■□□□□ 0.16
Msantd3Q9CR78 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
Msantd3Q9CR78 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Msantd3Q9CR78 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
Msantd3Q9CR78 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.02■□□□□ 0.16
Msantd3Q9CR78 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Msantd3Q9CR78 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Msantd3Q9CR78 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
Msantd3Q9CR78 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Msantd3Q9CR78 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msantd3Q9CR78 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msantd3Q9CR78 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msantd3Q9CR78 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msantd3Q9CR78 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Msantd3Q9CR78 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.01■□□□□ 0.15
Msantd3Q9CR78 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms