Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.67■□□□□ 0.42
Rpa3Q9CQ71 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.67■□□□□ 0.42
Rpa3Q9CQ71 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Rpa3Q9CQ71 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rpa3Q9CQ71 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.67■□□□□ 0.42
Rpa3Q9CQ71 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpa3Q9CQ71 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.67■□□□□ 0.42
Rpa3Q9CQ71 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpa3Q9CQ71 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpa3Q9CQ71 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rpa3Q9CQ71 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rpa3Q9CQ71 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpa3Q9CQ71 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpa3Q9CQ71 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rpa3Q9CQ71 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpa3Q9CQ71 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpa3Q9CQ71 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpa3Q9CQ71 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
Rpa3Q9CQ71 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpa3Q9CQ71 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpa3Q9CQ71 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpa3Q9CQ71 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Rpa3Q9CQ71 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpa3Q9CQ71 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpa3Q9CQ71 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rpa3Q9CQ71 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rpa3Q9CQ71 Gm7213-201ENSMUST00000215977 950 ntBASIC17.66■□□□□ 0.42
Rpa3Q9CQ71 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpa3Q9CQ71 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpa3Q9CQ71 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpa3Q9CQ71 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rpa3Q9CQ71 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rpa3Q9CQ71 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpa3Q9CQ71 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpa3Q9CQ71 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpa3Q9CQ71 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpa3Q9CQ71 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpa3Q9CQ71 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rpa3Q9CQ71 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpa3Q9CQ71 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rpa3Q9CQ71 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.65■□□□□ 0.42
Rpa3Q9CQ71 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpa3Q9CQ71 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpa3Q9CQ71 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpa3Q9CQ71 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpa3Q9CQ71 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpa3Q9CQ71 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpa3Q9CQ71 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpa3Q9CQ71 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.65■□□□□ 0.42
Rpa3Q9CQ71 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpa3Q9CQ71 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rpa3Q9CQ71 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpa3Q9CQ71 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rpa3Q9CQ71 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.65■□□□□ 0.42
Rpa3Q9CQ71 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rpa3Q9CQ71 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.65■□□□□ 0.42
Rpa3Q9CQ71 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rpa3Q9CQ71 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpa3Q9CQ71 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.65■□□□□ 0.42
Rpa3Q9CQ71 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpa3Q9CQ71 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.65■□□□□ 0.42
Rpa3Q9CQ71 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rpa3Q9CQ71 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpa3Q9CQ71 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpa3Q9CQ71 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rpa3Q9CQ71 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rpa3Q9CQ71 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpa3Q9CQ71 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpa3Q9CQ71 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpa3Q9CQ71 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpa3Q9CQ71 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rpa3Q9CQ71 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpa3Q9CQ71 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpa3Q9CQ71 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rpa3Q9CQ71 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpa3Q9CQ71 Gm9987-201ENSMUST00000069768 567 ntBASIC17.64■□□□□ 0.41
Rpa3Q9CQ71 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rpa3Q9CQ71 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpa3Q9CQ71 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpa3Q9CQ71 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rpa3Q9CQ71 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.64■□□□□ 0.41
Rpa3Q9CQ71 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpa3Q9CQ71 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpa3Q9CQ71 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpa3Q9CQ71 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpa3Q9CQ71 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpa3Q9CQ71 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpa3Q9CQ71 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpa3Q9CQ71 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rpa3Q9CQ71 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.63■□□□□ 0.41
Rpa3Q9CQ71 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.63■□□□□ 0.41
Rpa3Q9CQ71 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpa3Q9CQ71 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rpa3Q9CQ71 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rpa3Q9CQ71 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpa3Q9CQ71 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpa3Q9CQ71 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpa3Q9CQ71 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rpa3Q9CQ71 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rpa3Q9CQ71 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms