Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Hdac9Q99N13 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac9Q99N13 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac9Q99N13 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Hdac9Q99N13 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac9Q99N13 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Hdac9Q99N13 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac9Q99N13 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac9Q99N13 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Hdac9Q99N13 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.64■□□□□ 0.73
Hdac9Q99N13 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Hdac9Q99N13 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Hdac9Q99N13 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac9Q99N13 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac9Q99N13 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac9Q99N13 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac9Q99N13 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.64■□□□□ 0.73
Hdac9Q99N13 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac9Q99N13 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac9Q99N13 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Hdac9Q99N13 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac9Q99N13 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac9Q99N13 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac9Q99N13 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac9Q99N13 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac9Q99N13 Gm18856-201ENSMUST00000178096 1374 ntBASIC19.63■□□□□ 0.73
Hdac9Q99N13 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC19.63■□□□□ 0.73
Hdac9Q99N13 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.63■□□□□ 0.73
Hdac9Q99N13 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC19.63■□□□□ 0.73
Hdac9Q99N13 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.63■□□□□ 0.73
Hdac9Q99N13 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.63■□□□□ 0.73
Hdac9Q99N13 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.63■□□□□ 0.73
Hdac9Q99N13 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac9Q99N13 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac9Q99N13 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac9Q99N13 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac9Q99N13 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Hdac9Q99N13 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac9Q99N13 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac9Q99N13 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac9Q99N13 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac9Q99N13 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac9Q99N13 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac9Q99N13 Mir5131-201ENSMUST00000175426 93 ntBASIC19.62■□□□□ 0.73
Hdac9Q99N13 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.62■□□□□ 0.73
Hdac9Q99N13 Gm37935-201ENSMUST00000192012 982 ntBASIC19.62■□□□□ 0.73
Hdac9Q99N13 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.62■□□□□ 0.73
Hdac9Q99N13 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac9Q99N13 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac9Q99N13 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac9Q99N13 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac9Q99N13 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac9Q99N13 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac9Q99N13 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.61■□□□□ 0.73
Hdac9Q99N13 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac9Q99N13 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac9Q99N13 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac9Q99N13 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac9Q99N13 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac9Q99N13 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac9Q99N13 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Hdac9Q99N13 Gm1401-201ENSMUST00000122048 772 ntBASIC19.61■□□□□ 0.73
Hdac9Q99N13 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac9Q99N13 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac9Q99N13 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac9Q99N13 AC132104.2-201ENSMUST00000215011 266 ntBASIC19.61■□□□□ 0.73
Hdac9Q99N13 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac9Q99N13 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Hdac9Q99N13 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac9Q99N13 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac9Q99N13 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac9Q99N13 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac9Q99N13 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac9Q99N13 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Hdac9Q99N13 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac9Q99N13 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac9Q99N13 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac9Q99N13 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac9Q99N13 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac9Q99N13 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac9Q99N13 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.6■□□□□ 0.73
Hdac9Q99N13 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.6■□□□□ 0.73
Hdac9Q99N13 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC19.6■□□□□ 0.73
Hdac9Q99N13 Gm44357-201ENSMUST00000195897 142 ntBASIC19.6■□□□□ 0.73
Hdac9Q99N13 Gm19658-201ENSMUST00000196231 138 ntBASIC19.6■□□□□ 0.73
Hdac9Q99N13 Gm44367-201ENSMUST00000196836 138 ntBASIC19.6■□□□□ 0.73
Hdac9Q99N13 Gm44350-201ENSMUST00000197197 138 ntBASIC19.6■□□□□ 0.73
Hdac9Q99N13 Gm44390-201ENSMUST00000197533 144 ntBASIC19.6■□□□□ 0.73
Hdac9Q99N13 Gm44313-201ENSMUST00000198018 138 ntBASIC19.6■□□□□ 0.73
Hdac9Q99N13 Gm44486-201ENSMUST00000198508 138 ntBASIC19.6■□□□□ 0.73
Hdac9Q99N13 Gm44314-201ENSMUST00000199263 138 ntBASIC19.6■□□□□ 0.73
Hdac9Q99N13 Gm44394-201ENSMUST00000199558 138 ntBASIC19.6■□□□□ 0.73
Hdac9Q99N13 Gm44484-201ENSMUST00000199873 138 ntBASIC19.6■□□□□ 0.73
Hdac9Q99N13 Gm44466-201ENSMUST00000200264 138 ntBASIC19.6■□□□□ 0.73
Hdac9Q99N13 Gm44359-201ENSMUST00000200671 138 ntBASIC19.6■□□□□ 0.73
Hdac9Q99N13 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Hdac9Q99N13 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac9Q99N13 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac9Q99N13 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac9Q99N13 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms