Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cstf1Q99LC2 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cstf1Q99LC2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cstf1Q99LC2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cstf1Q99LC2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Cstf1Q99LC2 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cstf1Q99LC2 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cstf1Q99LC2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cstf1Q99LC2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cstf1Q99LC2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cstf1Q99LC2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cstf1Q99LC2 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.66■□□□□ 0.26
Cstf1Q99LC2 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cstf1Q99LC2 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.66■□□□□ 0.26
Cstf1Q99LC2 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cstf1Q99LC2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cstf1Q99LC2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Cstf1Q99LC2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cstf1Q99LC2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cstf1Q99LC2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cstf1Q99LC2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cstf1Q99LC2 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cstf1Q99LC2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.65■□□□□ 0.26
Cstf1Q99LC2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Cstf1Q99LC2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cstf1Q99LC2 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.65■□□□□ 0.26
Cstf1Q99LC2 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.65■□□□□ 0.26
Cstf1Q99LC2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.65■□□□□ 0.26
Cstf1Q99LC2 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.65■□□□□ 0.26
Cstf1Q99LC2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.65■□□□□ 0.26
Cstf1Q99LC2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cstf1Q99LC2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cstf1Q99LC2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cstf1Q99LC2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Cstf1Q99LC2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cstf1Q99LC2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cstf1Q99LC2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
Cstf1Q99LC2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Cstf1Q99LC2 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.64■□□□□ 0.26
Cstf1Q99LC2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cstf1Q99LC2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cstf1Q99LC2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cstf1Q99LC2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cstf1Q99LC2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cstf1Q99LC2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cstf1Q99LC2 Fst-202ENSMUST00000223640 2612 ntBASIC16.64■□□□□ 0.25
Cstf1Q99LC2 Rprl3-201ENSMUST00000157400 290 ntBASIC16.64■□□□□ 0.25
Cstf1Q99LC2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Cstf1Q99LC2 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cstf1Q99LC2 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.64■□□□□ 0.25
Cstf1Q99LC2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.64■□□□□ 0.25
Cstf1Q99LC2 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.64■□□□□ 0.25
Cstf1Q99LC2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cstf1Q99LC2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.64■□□□□ 0.25
Cstf1Q99LC2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.64■□□□□ 0.25
Cstf1Q99LC2 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cstf1Q99LC2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cstf1Q99LC2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cstf1Q99LC2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Cstf1Q99LC2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cstf1Q99LC2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cstf1Q99LC2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.63■□□□□ 0.25
Cstf1Q99LC2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cstf1Q99LC2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cstf1Q99LC2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cstf1Q99LC2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cstf1Q99LC2 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cstf1Q99LC2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cstf1Q99LC2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cstf1Q99LC2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cstf1Q99LC2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cstf1Q99LC2 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.63■□□□□ 0.25
Cstf1Q99LC2 Gm13186-201ENSMUST00000118031 316 ntBASIC16.63■□□□□ 0.25
Cstf1Q99LC2 Gm27702-201ENSMUST00000184512 56 ntBASIC16.63■□□□□ 0.25
Cstf1Q99LC2 Gm5264-201ENSMUST00000190584 848 ntBASIC16.63■□□□□ 0.25
Cstf1Q99LC2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cstf1Q99LC2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cstf1Q99LC2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cstf1Q99LC2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.63■□□□□ 0.25
Cstf1Q99LC2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cstf1Q99LC2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.63■□□□□ 0.25
Cstf1Q99LC2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cstf1Q99LC2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cstf1Q99LC2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cstf1Q99LC2 Phf7-203ENSMUST00000226565 1971 ntBASIC16.62■□□□□ 0.25
Cstf1Q99LC2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cstf1Q99LC2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cstf1Q99LC2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cstf1Q99LC2 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.62■□□□□ 0.25
Cstf1Q99LC2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cstf1Q99LC2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cstf1Q99LC2 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cstf1Q99LC2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cstf1Q99LC2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cstf1Q99LC2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cstf1Q99LC2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cstf1Q99LC2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cstf1Q99LC2 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cstf1Q99LC2 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.62■□□□□ 0.25
Cstf1Q99LC2 Gm6736-201ENSMUST00000166583 948 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms