Protein–RNA interactions for Protein: Q99KG7

Hps4, Hermansky-Pudlak syndrome 4 protein homolog, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps4Q99KG7 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hps4Q99KG7 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hps4Q99KG7 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Hps4Q99KG7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hps4Q99KG7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hps4Q99KG7 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hps4Q99KG7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hps4Q99KG7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Hps4Q99KG7 Gm15372-201ENSMUST00000120729 834 ntBASIC19.61■□□□□ 0.73
Hps4Q99KG7 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hps4Q99KG7 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.61■□□□□ 0.73
Hps4Q99KG7 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Hps4Q99KG7 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Hps4Q99KG7 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hps4Q99KG7 Gm44771-201ENSMUST00000206975 626 ntBASIC19.61■□□□□ 0.73
Hps4Q99KG7 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.61■□□□□ 0.73
Hps4Q99KG7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hps4Q99KG7 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hps4Q99KG7 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hps4Q99KG7 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hps4Q99KG7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hps4Q99KG7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hps4Q99KG7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hps4Q99KG7 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.6■□□□□ 0.73
Hps4Q99KG7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hps4Q99KG7 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hps4Q99KG7 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hps4Q99KG7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Hps4Q99KG7 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.6■□□□□ 0.73
Hps4Q99KG7 Gm10052-201ENSMUST00000168019 960 ntBASIC19.6■□□□□ 0.73
Hps4Q99KG7 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.6■□□□□ 0.73
Hps4Q99KG7 Gm7729-201ENSMUST00000050143 801 ntBASIC19.6■□□□□ 0.73
Hps4Q99KG7 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hps4Q99KG7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hps4Q99KG7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hps4Q99KG7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Hps4Q99KG7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.59■□□□□ 0.73
Hps4Q99KG7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hps4Q99KG7 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Hps4Q99KG7 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Hps4Q99KG7 Gm13312-201ENSMUST00000119631 718 ntBASIC19.59■□□□□ 0.73
Hps4Q99KG7 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.59■□□□□ 0.73
Hps4Q99KG7 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.59■□□□□ 0.73
Hps4Q99KG7 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hps4Q99KG7 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Hps4Q99KG7 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hps4Q99KG7 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hps4Q99KG7 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hps4Q99KG7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Hps4Q99KG7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.59■□□□□ 0.73
Hps4Q99KG7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hps4Q99KG7 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.59■□□□□ 0.73
Hps4Q99KG7 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hps4Q99KG7 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.58■□□□□ 0.73
Hps4Q99KG7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.58■□□□□ 0.73
Hps4Q99KG7 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.58■□□□□ 0.73
Hps4Q99KG7 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Hps4Q99KG7 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hps4Q99KG7 Mir8098-201ENSMUST00000184011 137 ntBASIC19.58■□□□□ 0.72
Hps4Q99KG7 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hps4Q99KG7 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Hps4Q99KG7 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.58■□□□□ 0.72
Hps4Q99KG7 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hps4Q99KG7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hps4Q99KG7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Hps4Q99KG7 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hps4Q99KG7 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hps4Q99KG7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hps4Q99KG7 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Hps4Q99KG7 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Hps4Q99KG7 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hps4Q99KG7 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hps4Q99KG7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hps4Q99KG7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hps4Q99KG7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Hps4Q99KG7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hps4Q99KG7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hps4Q99KG7 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hps4Q99KG7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hps4Q99KG7 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hps4Q99KG7 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hps4Q99KG7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hps4Q99KG7 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hps4Q99KG7 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hps4Q99KG7 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.57■□□□□ 0.72
Hps4Q99KG7 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.57■□□□□ 0.72
Hps4Q99KG7 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.57■□□□□ 0.72
Hps4Q99KG7 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hps4Q99KG7 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Hps4Q99KG7 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hps4Q99KG7 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hps4Q99KG7 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hps4Q99KG7 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hps4Q99KG7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hps4Q99KG7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hps4Q99KG7 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hps4Q99KG7 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hps4Q99KG7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hps4Q99KG7 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hps4Q99KG7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms