Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.23■□□□□ 0.67
Rfc4Q99J62 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rfc4Q99J62 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.23■□□□□ 0.67
Rfc4Q99J62 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfc4Q99J62 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rfc4Q99J62 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfc4Q99J62 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.23■□□□□ 0.67
Rfc4Q99J62 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfc4Q99J62 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfc4Q99J62 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rfc4Q99J62 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.23■□□□□ 0.67
Rfc4Q99J62 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfc4Q99J62 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Rfc4Q99J62 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfc4Q99J62 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfc4Q99J62 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.22■□□□□ 0.67
Rfc4Q99J62 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rfc4Q99J62 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfc4Q99J62 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfc4Q99J62 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfc4Q99J62 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfc4Q99J62 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfc4Q99J62 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfc4Q99J62 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfc4Q99J62 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfc4Q99J62 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rfc4Q99J62 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfc4Q99J62 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rfc4Q99J62 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfc4Q99J62 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfc4Q99J62 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.21■□□□□ 0.67
Rfc4Q99J62 Gm37935-201ENSMUST00000192012 982 ntBASIC19.21■□□□□ 0.67
Rfc4Q99J62 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.21■□□□□ 0.67
Rfc4Q99J62 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfc4Q99J62 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rfc4Q99J62 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Rfc4Q99J62 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.21■□□□□ 0.67
Rfc4Q99J62 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfc4Q99J62 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfc4Q99J62 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfc4Q99J62 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfc4Q99J62 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rfc4Q99J62 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.21■□□□□ 0.67
Rfc4Q99J62 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfc4Q99J62 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.2■□□□□ 0.66
Rfc4Q99J62 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfc4Q99J62 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfc4Q99J62 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfc4Q99J62 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.2■□□□□ 0.66
Rfc4Q99J62 Gm7862-201ENSMUST00000121461 292 ntBASIC19.2■□□□□ 0.66
Rfc4Q99J62 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rfc4Q99J62 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfc4Q99J62 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.2■□□□□ 0.66
Rfc4Q99J62 AC132104.2-201ENSMUST00000215011 266 ntBASIC19.2■□□□□ 0.66
Rfc4Q99J62 Gm6296-201ENSMUST00000222599 943 ntBASIC19.2■□□□□ 0.66
Rfc4Q99J62 AC138767.1-201ENSMUST00000222661 415 ntBASIC19.2■□□□□ 0.66
Rfc4Q99J62 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfc4Q99J62 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rfc4Q99J62 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Rfc4Q99J62 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Rfc4Q99J62 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rfc4Q99J62 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfc4Q99J62 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfc4Q99J62 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
Rfc4Q99J62 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rfc4Q99J62 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfc4Q99J62 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rfc4Q99J62 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfc4Q99J62 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfc4Q99J62 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfc4Q99J62 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfc4Q99J62 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rfc4Q99J62 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfc4Q99J62 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfc4Q99J62 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfc4Q99J62 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfc4Q99J62 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfc4Q99J62 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.19■□□□□ 0.66
Rfc4Q99J62 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rfc4Q99J62 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19.19■□□□□ 0.66
Rfc4Q99J62 Gm27867-201ENSMUST00000184778 125 ntBASIC19.19■□□□□ 0.66
Rfc4Q99J62 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC19.19■□□□□ 0.66
Rfc4Q99J62 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Rfc4Q99J62 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfc4Q99J62 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfc4Q99J62 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Rfc4Q99J62 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfc4Q99J62 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfc4Q99J62 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Rfc4Q99J62 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfc4Q99J62 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfc4Q99J62 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rfc4Q99J62 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rfc4Q99J62 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfc4Q99J62 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfc4Q99J62 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfc4Q99J62 Gm15165-201ENSMUST00000118140 502 ntBASIC19.18■□□□□ 0.66
Rfc4Q99J62 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfc4Q99J62 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.18■□□□□ 0.66
Rfc4Q99J62 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms