Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhac1Q91Y10 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Pcdhac1Q91Y10 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Pcdhac1Q91Y10 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhac1Q91Y10 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhac1Q91Y10 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhac1Q91Y10 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhac1Q91Y10 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhac1Q91Y10 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhac1Q91Y10 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Pcdhac1Q91Y10 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.64■□□□□ 0.09
Pcdhac1Q91Y10 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhac1Q91Y10 Dancr-204ENSMUST00000132389 2347 ntBASIC15.64■□□□□ 0.09
Pcdhac1Q91Y10 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhac1Q91Y10 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhac1Q91Y10 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdhac1Q91Y10 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhac1Q91Y10 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhac1Q91Y10 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.64■□□□□ 0.09
Pcdhac1Q91Y10 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhac1Q91Y10 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhac1Q91Y10 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhac1Q91Y10 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhac1Q91Y10 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhac1Q91Y10 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhac1Q91Y10 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhac1Q91Y10 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhac1Q91Y10 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhac1Q91Y10 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhac1Q91Y10 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhac1Q91Y10 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhac1Q91Y10 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhac1Q91Y10 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhac1Q91Y10 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhac1Q91Y10 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.63■□□□□ 0.09
Pcdhac1Q91Y10 Gm4974-201ENSMUST00000209974 875 ntBASIC15.63■□□□□ 0.09
Pcdhac1Q91Y10 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.63■□□□□ 0.09
Pcdhac1Q91Y10 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Pcdhac1Q91Y10 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhac1Q91Y10 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhac1Q91Y10 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pcdhac1Q91Y10 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhac1Q91Y10 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhac1Q91Y10 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhac1Q91Y10 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhac1Q91Y10 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhac1Q91Y10 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhac1Q91Y10 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhac1Q91Y10 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Pcdhac1Q91Y10 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhac1Q91Y10 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhac1Q91Y10 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Pcdhac1Q91Y10 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhac1Q91Y10 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Pcdhac1Q91Y10 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhac1Q91Y10 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhac1Q91Y10 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
Pcdhac1Q91Y10 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhac1Q91Y10 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhac1Q91Y10 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhac1Q91Y10 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdhac1Q91Y10 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Pcdhac1Q91Y10 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhac1Q91Y10 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhac1Q91Y10 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhac1Q91Y10 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhac1Q91Y10 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Pcdhac1Q91Y10 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhac1Q91Y10 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhac1Q91Y10 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.62■□□□□ 0.09
Pcdhac1Q91Y10 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdhac1Q91Y10 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhac1Q91Y10 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Pcdhac1Q91Y10 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Pcdhac1Q91Y10 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhac1Q91Y10 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhac1Q91Y10 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhac1Q91Y10 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhac1Q91Y10 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhac1Q91Y10 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhac1Q91Y10 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.61■□□□□ 0.09
Pcdhac1Q91Y10 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhac1Q91Y10 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhac1Q91Y10 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdhac1Q91Y10 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdhac1Q91Y10 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdhac1Q91Y10 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhac1Q91Y10 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhac1Q91Y10 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhac1Q91Y10 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhac1Q91Y10 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhac1Q91Y10 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.61■□□□□ 0.09
Pcdhac1Q91Y10 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhac1Q91Y10 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhac1Q91Y10 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhac1Q91Y10 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdhac1Q91Y10 Gm10517-202ENSMUST00000192970 758 ntBASIC15.61■□□□□ 0.09
Pcdhac1Q91Y10 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Pcdhac1Q91Y10 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhac1Q91Y10 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms