Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdhb22Q91XZ8 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
Pcdhb22Q91XZ8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdhb22Q91XZ8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdhb22Q91XZ8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Pcdhb22Q91XZ8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb22Q91XZ8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb22Q91XZ8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb22Q91XZ8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.51■□□□□ 0.71
Pcdhb22Q91XZ8 Gm6659-201ENSMUST00000174752 547 ntBASIC19.51■□□□□ 0.71
Pcdhb22Q91XZ8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb22Q91XZ8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb22Q91XZ8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Pcdhb22Q91XZ8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Pcdhb22Q91XZ8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb22Q91XZ8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb22Q91XZ8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb22Q91XZ8 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb22Q91XZ8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb22Q91XZ8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb22Q91XZ8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb22Q91XZ8 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.51■□□□□ 0.71
Pcdhb22Q91XZ8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb22Q91XZ8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Pcdhb22Q91XZ8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb22Q91XZ8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Pcdhb22Q91XZ8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb22Q91XZ8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.5■□□□□ 0.71
Pcdhb22Q91XZ8 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.5■□□□□ 0.71
Pcdhb22Q91XZ8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb22Q91XZ8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb22Q91XZ8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb22Q91XZ8 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb22Q91XZ8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Pcdhb22Q91XZ8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb22Q91XZ8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb22Q91XZ8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Pcdhb22Q91XZ8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb22Q91XZ8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb22Q91XZ8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb22Q91XZ8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Pcdhb22Q91XZ8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb22Q91XZ8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb22Q91XZ8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb22Q91XZ8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb22Q91XZ8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb22Q91XZ8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb22Q91XZ8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb22Q91XZ8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb22Q91XZ8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.49■□□□□ 0.71
Pcdhb22Q91XZ8 Gm9013-201ENSMUST00000132939 882 ntBASIC19.49■□□□□ 0.71
Pcdhb22Q91XZ8 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb22Q91XZ8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb22Q91XZ8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.49■□□□□ 0.71
Pcdhb22Q91XZ8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.49■□□□□ 0.71
Pcdhb22Q91XZ8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.49■□□□□ 0.71
Pcdhb22Q91XZ8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.49■□□□□ 0.71
Pcdhb22Q91XZ8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb22Q91XZ8 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb22Q91XZ8 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb22Q91XZ8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb22Q91XZ8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb22Q91XZ8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb22Q91XZ8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb22Q91XZ8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb22Q91XZ8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb22Q91XZ8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Pcdhb22Q91XZ8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb22Q91XZ8 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb22Q91XZ8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb22Q91XZ8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb22Q91XZ8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb22Q91XZ8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb22Q91XZ8 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb22Q91XZ8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb22Q91XZ8 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb22Q91XZ8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb22Q91XZ8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb22Q91XZ8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb22Q91XZ8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb22Q91XZ8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb22Q91XZ8 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Pcdhb22Q91XZ8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb22Q91XZ8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb22Q91XZ8 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.47■□□□□ 0.71
Pcdhb22Q91XZ8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.47■□□□□ 0.71
Pcdhb22Q91XZ8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb22Q91XZ8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.47■□□□□ 0.71
Pcdhb22Q91XZ8 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Pcdhb22Q91XZ8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Pcdhb22Q91XZ8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb22Q91XZ8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.47■□□□□ 0.71
Pcdhb22Q91XZ8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb22Q91XZ8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Pcdhb22Q91XZ8 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
Pcdhb22Q91XZ8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb22Q91XZ8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb22Q91XZ8 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Pcdhb22Q91XZ8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb22Q91XZ8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms