Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Pcdhb5Q91XZ5 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb5Q91XZ5 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb5Q91XZ5 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb5Q91XZ5 Gm44430-201ENSMUST00000203376 995 ntBASIC19.69■□□□□ 0.74
Pcdhb5Q91XZ5 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb5Q91XZ5 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.69■□□□□ 0.74
Pcdhb5Q91XZ5 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb5Q91XZ5 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb5Q91XZ5 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb5Q91XZ5 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb5Q91XZ5 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb5Q91XZ5 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb5Q91XZ5 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.69■□□□□ 0.74
Pcdhb5Q91XZ5 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb5Q91XZ5 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb5Q91XZ5 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb5Q91XZ5 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb5Q91XZ5 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.68■□□□□ 0.74
Pcdhb5Q91XZ5 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Pcdhb5Q91XZ5 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb5Q91XZ5 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.68■□□□□ 0.74
Pcdhb5Q91XZ5 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb5Q91XZ5 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb5Q91XZ5 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb5Q91XZ5 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb5Q91XZ5 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb5Q91XZ5 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb5Q91XZ5 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb5Q91XZ5 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb5Q91XZ5 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Pcdhb5Q91XZ5 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb5Q91XZ5 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb5Q91XZ5 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb5Q91XZ5 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb5Q91XZ5 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb5Q91XZ5 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb5Q91XZ5 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.67■□□□□ 0.74
Pcdhb5Q91XZ5 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Pcdhb5Q91XZ5 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
Pcdhb5Q91XZ5 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
Pcdhb5Q91XZ5 Gm6443-201ENSMUST00000203599 874 ntBASIC19.67■□□□□ 0.74
Pcdhb5Q91XZ5 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb5Q91XZ5 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb5Q91XZ5 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb5Q91XZ5 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb5Q91XZ5 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Pcdhb5Q91XZ5 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb5Q91XZ5 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb5Q91XZ5 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb5Q91XZ5 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Pcdhb5Q91XZ5 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb5Q91XZ5 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Pcdhb5Q91XZ5 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.66■□□□□ 0.74
Pcdhb5Q91XZ5 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb5Q91XZ5 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb5Q91XZ5 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.66■□□□□ 0.74
Pcdhb5Q91XZ5 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.66■□□□□ 0.74
Pcdhb5Q91XZ5 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb5Q91XZ5 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb5Q91XZ5 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Pcdhb5Q91XZ5 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb5Q91XZ5 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Pcdhb5Q91XZ5 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb5Q91XZ5 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.65■□□□□ 0.74
Pcdhb5Q91XZ5 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb5Q91XZ5 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.65■□□□□ 0.74
Pcdhb5Q91XZ5 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb5Q91XZ5 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb5Q91XZ5 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb5Q91XZ5 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
Pcdhb5Q91XZ5 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Pcdhb5Q91XZ5 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.65■□□□□ 0.74
Pcdhb5Q91XZ5 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC19.65■□□□□ 0.74
Pcdhb5Q91XZ5 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb5Q91XZ5 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.65■□□□□ 0.74
Pcdhb5Q91XZ5 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb5Q91XZ5 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.65■□□□□ 0.74
Pcdhb5Q91XZ5 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb5Q91XZ5 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb5Q91XZ5 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb5Q91XZ5 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb5Q91XZ5 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb5Q91XZ5 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.64■□□□□ 0.74
Pcdhb5Q91XZ5 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdhb5Q91XZ5 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb5Q91XZ5 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb5Q91XZ5 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb5Q91XZ5 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.64■□□□□ 0.73
Pcdhb5Q91XZ5 Gm43514-201ENSMUST00000198852 424 ntBASIC19.64■□□□□ 0.73
Pcdhb5Q91XZ5 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.64■□□□□ 0.73
Pcdhb5Q91XZ5 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb5Q91XZ5 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.64■□□□□ 0.73
Pcdhb5Q91XZ5 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.64■□□□□ 0.73
Pcdhb5Q91XZ5 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb5Q91XZ5 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb5Q91XZ5 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Pcdhb5Q91XZ5 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb5Q91XZ5 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb5Q91XZ5 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms