Protein–RNA interactions for Protein: Q8VEJ4

Nle1, Notchless protein homolog 1, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nle1Q8VEJ4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nle1Q8VEJ4 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nle1Q8VEJ4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nle1Q8VEJ4 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nle1Q8VEJ4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nle1Q8VEJ4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Nle1Q8VEJ4 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nle1Q8VEJ4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.29■□□□□ 0.36
Nle1Q8VEJ4 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.29■□□□□ 0.36
Nle1Q8VEJ4 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.29■□□□□ 0.36
Nle1Q8VEJ4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.29■□□□□ 0.36
Nle1Q8VEJ4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nle1Q8VEJ4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nle1Q8VEJ4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nle1Q8VEJ4 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nle1Q8VEJ4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nle1Q8VEJ4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Nle1Q8VEJ4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nle1Q8VEJ4 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nle1Q8VEJ4 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nle1Q8VEJ4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.28■□□□□ 0.36
Nle1Q8VEJ4 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nle1Q8VEJ4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nle1Q8VEJ4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nle1Q8VEJ4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nle1Q8VEJ4 Gm17807-201ENSMUST00000186869 298 ntBASIC17.28■□□□□ 0.36
Nle1Q8VEJ4 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nle1Q8VEJ4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.28■□□□□ 0.36
Nle1Q8VEJ4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.28■□□□□ 0.36
Nle1Q8VEJ4 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.28■□□□□ 0.36
Nle1Q8VEJ4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nle1Q8VEJ4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nle1Q8VEJ4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nle1Q8VEJ4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Nle1Q8VEJ4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nle1Q8VEJ4 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nle1Q8VEJ4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nle1Q8VEJ4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Nle1Q8VEJ4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nle1Q8VEJ4 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nle1Q8VEJ4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.27■□□□□ 0.36
Nle1Q8VEJ4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Nle1Q8VEJ4 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.27■□□□□ 0.36
Nle1Q8VEJ4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nle1Q8VEJ4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nle1Q8VEJ4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nle1Q8VEJ4 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Nle1Q8VEJ4 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nle1Q8VEJ4 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nle1Q8VEJ4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
Nle1Q8VEJ4 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nle1Q8VEJ4 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nle1Q8VEJ4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Nle1Q8VEJ4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nle1Q8VEJ4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Nle1Q8VEJ4 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nle1Q8VEJ4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nle1Q8VEJ4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Nle1Q8VEJ4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nle1Q8VEJ4 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nle1Q8VEJ4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nle1Q8VEJ4 Gm15794-201ENSMUST00000120182 631 ntBASIC17.26■□□□□ 0.35
Nle1Q8VEJ4 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nle1Q8VEJ4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.26■□□□□ 0.35
Nle1Q8VEJ4 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.26■□□□□ 0.35
Nle1Q8VEJ4 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nle1Q8VEJ4 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nle1Q8VEJ4 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Nle1Q8VEJ4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nle1Q8VEJ4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nle1Q8VEJ4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nle1Q8VEJ4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nle1Q8VEJ4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nle1Q8VEJ4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.26■□□□□ 0.35
Nle1Q8VEJ4 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nle1Q8VEJ4 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nle1Q8VEJ4 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nle1Q8VEJ4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nle1Q8VEJ4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nle1Q8VEJ4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Nle1Q8VEJ4 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nle1Q8VEJ4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nle1Q8VEJ4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.25■□□□□ 0.35
Nle1Q8VEJ4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nle1Q8VEJ4 Gm27357-201ENSMUST00000183754 135 ntBASIC17.25■□□□□ 0.35
Nle1Q8VEJ4 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nle1Q8VEJ4 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nle1Q8VEJ4 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nle1Q8VEJ4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nle1Q8VEJ4 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nle1Q8VEJ4 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nle1Q8VEJ4 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nle1Q8VEJ4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.25■□□□□ 0.35
Nle1Q8VEJ4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nle1Q8VEJ4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nle1Q8VEJ4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nle1Q8VEJ4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nle1Q8VEJ4 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nle1Q8VEJ4 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.24■□□□□ 0.35
Nle1Q8VEJ4 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms