Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retreg1dQ8VE91 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retreg1dQ8VE91 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.58■□□□□ 0.24
Retreg1dQ8VE91 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.58■□□□□ 0.24
Retreg1dQ8VE91 Gm27389-201ENSMUST00000183622 195 ntBASIC16.58■□□□□ 0.24
Retreg1dQ8VE91 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Retreg1dQ8VE91 Gm21559-201ENSMUST00000220638 855 ntBASIC16.58■□□□□ 0.24
Retreg1dQ8VE91 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Retreg1dQ8VE91 Gm8587-201ENSMUST00000076538 843 ntBASIC16.58■□□□□ 0.24
Retreg1dQ8VE91 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retreg1dQ8VE91 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Retreg1dQ8VE91 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.58■□□□□ 0.24
Retreg1dQ8VE91 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retreg1dQ8VE91 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retreg1dQ8VE91 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retreg1dQ8VE91 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.58■□□□□ 0.24
Retreg1dQ8VE91 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.58■□□□□ 0.24
Retreg1dQ8VE91 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retreg1dQ8VE91 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.58■□□□□ 0.24
Retreg1dQ8VE91 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retreg1dQ8VE91 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retreg1dQ8VE91 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retreg1dQ8VE91 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Retreg1dQ8VE91 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retreg1dQ8VE91 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retreg1dQ8VE91 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retreg1dQ8VE91 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retreg1dQ8VE91 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retreg1dQ8VE91 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retreg1dQ8VE91 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retreg1dQ8VE91 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retreg1dQ8VE91 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.57■□□□□ 0.24
Retreg1dQ8VE91 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retreg1dQ8VE91 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.57■□□□□ 0.24
Retreg1dQ8VE91 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retreg1dQ8VE91 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.57■□□□□ 0.24
Retreg1dQ8VE91 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retreg1dQ8VE91 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.56■□□□□ 0.24
Retreg1dQ8VE91 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retreg1dQ8VE91 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.56■□□□□ 0.24
Retreg1dQ8VE91 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retreg1dQ8VE91 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retreg1dQ8VE91 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retreg1dQ8VE91 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Retreg1dQ8VE91 Mir1668-201ENSMUST00000184114 107 ntBASIC16.56■□□□□ 0.24
Retreg1dQ8VE91 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retreg1dQ8VE91 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Retreg1dQ8VE91 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Retreg1dQ8VE91 Gm10819-201ENSMUST00000099988 561 ntBASIC16.56■□□□□ 0.24
Retreg1dQ8VE91 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retreg1dQ8VE91 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retreg1dQ8VE91 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retreg1dQ8VE91 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retreg1dQ8VE91 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Retreg1dQ8VE91 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retreg1dQ8VE91 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retreg1dQ8VE91 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retreg1dQ8VE91 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.56■□□□□ 0.24
Retreg1dQ8VE91 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retreg1dQ8VE91 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retreg1dQ8VE91 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Retreg1dQ8VE91 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retreg1dQ8VE91 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retreg1dQ8VE91 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retreg1dQ8VE91 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retreg1dQ8VE91 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retreg1dQ8VE91 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.55■□□□□ 0.24
Retreg1dQ8VE91 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.55■□□□□ 0.24
Retreg1dQ8VE91 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.55■□□□□ 0.24
Retreg1dQ8VE91 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.55■□□□□ 0.24
Retreg1dQ8VE91 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retreg1dQ8VE91 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
Retreg1dQ8VE91 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retreg1dQ8VE91 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retreg1dQ8VE91 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retreg1dQ8VE91 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Retreg1dQ8VE91 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.55■□□□□ 0.24
Retreg1dQ8VE91 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Retreg1dQ8VE91 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.55■□□□□ 0.24
Retreg1dQ8VE91 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retreg1dQ8VE91 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Retreg1dQ8VE91 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retreg1dQ8VE91 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retreg1dQ8VE91 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retreg1dQ8VE91 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Retreg1dQ8VE91 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retreg1dQ8VE91 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Retreg1dQ8VE91 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
Retreg1dQ8VE91 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Retreg1dQ8VE91 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retreg1dQ8VE91 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retreg1dQ8VE91 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.54■□□□□ 0.24
Retreg1dQ8VE91 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retreg1dQ8VE91 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.54■□□□□ 0.24
Retreg1dQ8VE91 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retreg1dQ8VE91 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Retreg1dQ8VE91 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retreg1dQ8VE91 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retreg1dQ8VE91 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Retreg1dQ8VE91 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms