Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Atp2a1Q8R429 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Atp2a1Q8R429 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Atp2a1Q8R429 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atp2a1Q8R429 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atp2a1Q8R429 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atp2a1Q8R429 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Atp2a1Q8R429 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.68■□□□□ 0.58
Atp2a1Q8R429 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Atp2a1Q8R429 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.68■□□□□ 0.58
Atp2a1Q8R429 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.68■□□□□ 0.58
Atp2a1Q8R429 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atp2a1Q8R429 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atp2a1Q8R429 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atp2a1Q8R429 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atp2a1Q8R429 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Atp2a1Q8R429 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atp2a1Q8R429 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atp2a1Q8R429 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.68■□□□□ 0.58
Atp2a1Q8R429 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.68■□□□□ 0.58
Atp2a1Q8R429 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.68■□□□□ 0.58
Atp2a1Q8R429 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atp2a1Q8R429 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.68■□□□□ 0.58
Atp2a1Q8R429 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atp2a1Q8R429 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atp2a1Q8R429 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atp2a1Q8R429 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atp2a1Q8R429 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.67■□□□□ 0.58
Atp2a1Q8R429 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Atp2a1Q8R429 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.67■□□□□ 0.58
Atp2a1Q8R429 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Atp2a1Q8R429 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.67■□□□□ 0.58
Atp2a1Q8R429 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atp2a1Q8R429 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atp2a1Q8R429 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atp2a1Q8R429 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
Atp2a1Q8R429 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atp2a1Q8R429 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atp2a1Q8R429 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Atp2a1Q8R429 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atp2a1Q8R429 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atp2a1Q8R429 Gm7153-201ENSMUST00000117092 455 ntBASIC18.66■□□□□ 0.58
Atp2a1Q8R429 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.66■□□□□ 0.58
Atp2a1Q8R429 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atp2a1Q8R429 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Atp2a1Q8R429 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Atp2a1Q8R429 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atp2a1Q8R429 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atp2a1Q8R429 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atp2a1Q8R429 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atp2a1Q8R429 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atp2a1Q8R429 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atp2a1Q8R429 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atp2a1Q8R429 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atp2a1Q8R429 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atp2a1Q8R429 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atp2a1Q8R429 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atp2a1Q8R429 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atp2a1Q8R429 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Atp2a1Q8R429 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.65■□□□□ 0.58
Atp2a1Q8R429 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atp2a1Q8R429 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.65■□□□□ 0.58
Atp2a1Q8R429 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.65■□□□□ 0.58
Atp2a1Q8R429 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atp2a1Q8R429 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Atp2a1Q8R429 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atp2a1Q8R429 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atp2a1Q8R429 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atp2a1Q8R429 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atp2a1Q8R429 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Atp2a1Q8R429 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atp2a1Q8R429 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Atp2a1Q8R429 Gm44450-201ENSMUST00000199528 114 ntBASIC18.64■□□□□ 0.57
Atp2a1Q8R429 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Atp2a1Q8R429 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atp2a1Q8R429 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atp2a1Q8R429 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atp2a1Q8R429 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.64■□□□□ 0.57
Atp2a1Q8R429 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atp2a1Q8R429 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Atp2a1Q8R429 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atp2a1Q8R429 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.64■□□□□ 0.57
Atp2a1Q8R429 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atp2a1Q8R429 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.63■□□□□ 0.57
Atp2a1Q8R429 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atp2a1Q8R429 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atp2a1Q8R429 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atp2a1Q8R429 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atp2a1Q8R429 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atp2a1Q8R429 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Atp2a1Q8R429 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Atp2a1Q8R429 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.63■□□□□ 0.57
Atp2a1Q8R429 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Atp2a1Q8R429 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Atp2a1Q8R429 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atp2a1Q8R429 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Atp2a1Q8R429 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atp2a1Q8R429 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atp2a1Q8R429 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atp2a1Q8R429 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms