Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Chmp7Q8R1T1 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Chmp7Q8R1T1 Gm45203-201ENSMUST00000206384 1831 ntBASIC21.37■■□□□ 1.01
Chmp7Q8R1T1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Chmp7Q8R1T1 Gm18733-201ENSMUST00000173950 856 ntBASIC21.37■■□□□ 1.01
Chmp7Q8R1T1 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Chmp7Q8R1T1 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC21.37■■□□□ 1.01
Chmp7Q8R1T1 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Chmp7Q8R1T1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Chmp7Q8R1T1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Chmp7Q8R1T1 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC21.37■■□□□ 1.01
Chmp7Q8R1T1 Gm16499-203ENSMUST00000204633 2177 ntBASIC21.37■■□□□ 1.01
Chmp7Q8R1T1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Chmp7Q8R1T1 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Chmp7Q8R1T1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC21.36■■□□□ 1.01
Chmp7Q8R1T1 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Chmp7Q8R1T1 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Chmp7Q8R1T1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Chmp7Q8R1T1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Chmp7Q8R1T1 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Chmp7Q8R1T1 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Chmp7Q8R1T1 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Chmp7Q8R1T1 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC21.36■■□□□ 1.01
Chmp7Q8R1T1 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Chmp7Q8R1T1 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Chmp7Q8R1T1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Chmp7Q8R1T1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Chmp7Q8R1T1 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC21.36■■□□□ 1.01
Chmp7Q8R1T1 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Chmp7Q8R1T1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Chmp7Q8R1T1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Chmp7Q8R1T1 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Chmp7Q8R1T1 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
Chmp7Q8R1T1 Gm15165-201ENSMUST00000118140 502 ntBASIC21.35■■□□□ 1.01
Chmp7Q8R1T1 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC21.35■■□□□ 1.01
Chmp7Q8R1T1 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Chmp7Q8R1T1 Gm1818-201ENSMUST00000169406 1184 ntBASIC21.35■■□□□ 1.01
Chmp7Q8R1T1 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Chmp7Q8R1T1 Gm27867-201ENSMUST00000184778 125 ntBASIC21.35■■□□□ 1.01
Chmp7Q8R1T1 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC21.35■■□□□ 1.01
Chmp7Q8R1T1 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC21.35■■□□□ 1.01
Chmp7Q8R1T1 Rps4l-201ENSMUST00000071745 943 ntBASIC21.35■■□□□ 1.01
Chmp7Q8R1T1 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC21.35■■□□□ 1.01
Chmp7Q8R1T1 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Chmp7Q8R1T1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Chmp7Q8R1T1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Chmp7Q8R1T1 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Chmp7Q8R1T1 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.35■■□□□ 1.01
Chmp7Q8R1T1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chmp7Q8R1T1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chmp7Q8R1T1 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC21.34■■□□□ 1.01
Chmp7Q8R1T1 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC21.34■■□□□ 1.01
Chmp7Q8R1T1 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Chmp7Q8R1T1 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chmp7Q8R1T1 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chmp7Q8R1T1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chmp7Q8R1T1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chmp7Q8R1T1 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chmp7Q8R1T1 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chmp7Q8R1T1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC21.34■■□□□ 1.01
Chmp7Q8R1T1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
Chmp7Q8R1T1 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Chmp7Q8R1T1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC21.33■■□□□ 1.01
Chmp7Q8R1T1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Chmp7Q8R1T1 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Chmp7Q8R1T1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC21.33■■□□□ 1.01
Chmp7Q8R1T1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
Chmp7Q8R1T1 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC21.33■■□□□ 1.01
Chmp7Q8R1T1 Gm44454-201ENSMUST00000198541 138 ntBASIC21.33■■□□□ 1.01
Chmp7Q8R1T1 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Chmp7Q8R1T1 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Chmp7Q8R1T1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Chmp7Q8R1T1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Chmp7Q8R1T1 Gm43808-201ENSMUST00000202534 2065 ntBASIC21.33■■□□□ 1
Chmp7Q8R1T1 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Chmp7Q8R1T1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Chmp7Q8R1T1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Chmp7Q8R1T1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Chmp7Q8R1T1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Chmp7Q8R1T1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Chmp7Q8R1T1 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC21.32■■□□□ 1
Chmp7Q8R1T1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC21.32■■□□□ 1
Chmp7Q8R1T1 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC21.32■■□□□ 1
Chmp7Q8R1T1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Chmp7Q8R1T1 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Chmp7Q8R1T1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Chmp7Q8R1T1 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Chmp7Q8R1T1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Chmp7Q8R1T1 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Chmp7Q8R1T1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Chmp7Q8R1T1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Chmp7Q8R1T1 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC21.32■■□□□ 1
Chmp7Q8R1T1 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC21.31■■□□□ 1
Chmp7Q8R1T1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Chmp7Q8R1T1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Chmp7Q8R1T1 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Chmp7Q8R1T1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Chmp7Q8R1T1 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Chmp7Q8R1T1 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Chmp7Q8R1T1 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms