Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clip4Q8CI96 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clip4Q8CI96 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clip4Q8CI96 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Clip4Q8CI96 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Clip4Q8CI96 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Clip4Q8CI96 Gm24841-201ENSMUST00000158676 357 ntBASIC16.86■□□□□ 0.29
Clip4Q8CI96 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.86■□□□□ 0.29
Clip4Q8CI96 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clip4Q8CI96 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clip4Q8CI96 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Clip4Q8CI96 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Clip4Q8CI96 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clip4Q8CI96 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clip4Q8CI96 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clip4Q8CI96 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clip4Q8CI96 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Clip4Q8CI96 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clip4Q8CI96 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clip4Q8CI96 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clip4Q8CI96 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clip4Q8CI96 Dancr-204ENSMUST00000132389 2347 ntBASIC16.85■□□□□ 0.29
Clip4Q8CI96 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Clip4Q8CI96 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.85■□□□□ 0.29
Clip4Q8CI96 Gm11539-201ENSMUST00000119837 557 ntBASIC16.85■□□□□ 0.29
Clip4Q8CI96 Gm13436-201ENSMUST00000120418 567 ntBASIC16.85■□□□□ 0.29
Clip4Q8CI96 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Clip4Q8CI96 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Clip4Q8CI96 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clip4Q8CI96 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clip4Q8CI96 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clip4Q8CI96 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clip4Q8CI96 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.85■□□□□ 0.29
Clip4Q8CI96 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Clip4Q8CI96 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clip4Q8CI96 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clip4Q8CI96 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clip4Q8CI96 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clip4Q8CI96 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Clip4Q8CI96 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Clip4Q8CI96 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clip4Q8CI96 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clip4Q8CI96 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clip4Q8CI96 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clip4Q8CI96 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clip4Q8CI96 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clip4Q8CI96 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clip4Q8CI96 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clip4Q8CI96 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Clip4Q8CI96 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clip4Q8CI96 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clip4Q8CI96 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Clip4Q8CI96 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.84■□□□□ 0.29
Clip4Q8CI96 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Clip4Q8CI96 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Clip4Q8CI96 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Clip4Q8CI96 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clip4Q8CI96 Gm6433-201ENSMUST00000118634 875 ntBASIC16.84■□□□□ 0.29
Clip4Q8CI96 Gm13559-201ENSMUST00000120476 863 ntBASIC16.84■□□□□ 0.29
Clip4Q8CI96 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.84■□□□□ 0.29
Clip4Q8CI96 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Clip4Q8CI96 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Clip4Q8CI96 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Clip4Q8CI96 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Clip4Q8CI96 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clip4Q8CI96 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Clip4Q8CI96 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clip4Q8CI96 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clip4Q8CI96 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Clip4Q8CI96 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clip4Q8CI96 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clip4Q8CI96 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clip4Q8CI96 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clip4Q8CI96 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Clip4Q8CI96 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clip4Q8CI96 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Clip4Q8CI96 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Clip4Q8CI96 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Clip4Q8CI96 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.83■□□□□ 0.28
Clip4Q8CI96 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Clip4Q8CI96 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.83■□□□□ 0.28
Clip4Q8CI96 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Clip4Q8CI96 Gm13836-201ENSMUST00000121159 501 ntBASIC16.83■□□□□ 0.28
Clip4Q8CI96 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Clip4Q8CI96 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Clip4Q8CI96 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Clip4Q8CI96 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Clip4Q8CI96 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Clip4Q8CI96 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Clip4Q8CI96 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clip4Q8CI96 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clip4Q8CI96 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Clip4Q8CI96 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clip4Q8CI96 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Clip4Q8CI96 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Clip4Q8CI96 Gm9987-201ENSMUST00000069768 567 ntBASIC16.83■□□□□ 0.28
Clip4Q8CI96 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clip4Q8CI96 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clip4Q8CI96 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clip4Q8CI96 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms