Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.34■□□□□ 0.21
Zc3h3Q8CHP0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Zc3h3Q8CHP0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Zc3h3Q8CHP0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Zc3h3Q8CHP0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Zc3h3Q8CHP0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Zc3h3Q8CHP0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Zc3h3Q8CHP0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Zc3h3Q8CHP0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Zc3h3Q8CHP0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.34■□□□□ 0.21
Zc3h3Q8CHP0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Zc3h3Q8CHP0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.33■□□□□ 0.21
Zc3h3Q8CHP0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Zc3h3Q8CHP0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Zc3h3Q8CHP0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Zc3h3Q8CHP0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Zc3h3Q8CHP0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Zc3h3Q8CHP0 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.33■□□□□ 0.2
Zc3h3Q8CHP0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Zc3h3Q8CHP0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.33■□□□□ 0.2
Zc3h3Q8CHP0 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.33■□□□□ 0.2
Zc3h3Q8CHP0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Zc3h3Q8CHP0 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.33■□□□□ 0.2
Zc3h3Q8CHP0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Zc3h3Q8CHP0 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.33■□□□□ 0.2
Zc3h3Q8CHP0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Zc3h3Q8CHP0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Zc3h3Q8CHP0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Zc3h3Q8CHP0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Zc3h3Q8CHP0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Zc3h3Q8CHP0 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.32■□□□□ 0.2
Zc3h3Q8CHP0 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.32■□□□□ 0.2
Zc3h3Q8CHP0 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zc3h3Q8CHP0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.32■□□□□ 0.2
Zc3h3Q8CHP0 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Zc3h3Q8CHP0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Zc3h3Q8CHP0 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Zc3h3Q8CHP0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Zc3h3Q8CHP0 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.32■□□□□ 0.2
Zc3h3Q8CHP0 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.32■□□□□ 0.2
Zc3h3Q8CHP0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.32■□□□□ 0.2
Zc3h3Q8CHP0 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.32■□□□□ 0.2
Zc3h3Q8CHP0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Zc3h3Q8CHP0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zc3h3Q8CHP0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zc3h3Q8CHP0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zc3h3Q8CHP0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Zc3h3Q8CHP0 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zc3h3Q8CHP0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zc3h3Q8CHP0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Zc3h3Q8CHP0 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h3Q8CHP0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h3Q8CHP0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h3Q8CHP0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h3Q8CHP0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h3Q8CHP0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Zc3h3Q8CHP0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h3Q8CHP0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h3Q8CHP0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h3Q8CHP0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h3Q8CHP0 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h3Q8CHP0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h3Q8CHP0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.31■□□□□ 0.2
Zc3h3Q8CHP0 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h3Q8CHP0 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.31■□□□□ 0.2
Zc3h3Q8CHP0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h3Q8CHP0 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h3Q8CHP0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Zc3h3Q8CHP0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h3Q8CHP0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Zc3h3Q8CHP0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h3Q8CHP0 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h3Q8CHP0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Zc3h3Q8CHP0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h3Q8CHP0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h3Q8CHP0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zc3h3Q8CHP0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h3Q8CHP0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Zc3h3Q8CHP0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h3Q8CHP0 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
Zc3h3Q8CHP0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h3Q8CHP0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h3Q8CHP0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h3Q8CHP0 Gm4459-201ENSMUST00000118750 468 ntBASIC16.3■□□□□ 0.2
Zc3h3Q8CHP0 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h3Q8CHP0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h3Q8CHP0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.3■□□□□ 0.2
Zc3h3Q8CHP0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Zc3h3Q8CHP0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h3Q8CHP0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.3■□□□□ 0.2
Zc3h3Q8CHP0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h3Q8CHP0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h3Q8CHP0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h3Q8CHP0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h3Q8CHP0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Zc3h3Q8CHP0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.3■□□□□ 0.2
Zc3h3Q8CHP0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Zc3h3Q8CHP0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zc3h3Q8CHP0 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zc3h3Q8CHP0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms