Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rab43Q8CG50 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.29■□□□□ 0.2
Rab43Q8CG50 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Rab43Q8CG50 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab43Q8CG50 Gm15372-201ENSMUST00000120729 834 ntBASIC16.28■□□□□ 0.2
Rab43Q8CG50 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.28■□□□□ 0.2
Rab43Q8CG50 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab43Q8CG50 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rab43Q8CG50 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab43Q8CG50 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab43Q8CG50 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rab43Q8CG50 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.28■□□□□ 0.2
Rab43Q8CG50 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab43Q8CG50 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rab43Q8CG50 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab43Q8CG50 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.28■□□□□ 0.2
Rab43Q8CG50 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rab43Q8CG50 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rab43Q8CG50 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab43Q8CG50 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rab43Q8CG50 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rab43Q8CG50 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rab43Q8CG50 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rab43Q8CG50 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rab43Q8CG50 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rab43Q8CG50 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rab43Q8CG50 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rab43Q8CG50 Gm13884-201ENSMUST00000118103 829 ntBASIC16.27■□□□□ 0.2
Rab43Q8CG50 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rab43Q8CG50 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Rab43Q8CG50 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rab43Q8CG50 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rab43Q8CG50 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rab43Q8CG50 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rab43Q8CG50 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rab43Q8CG50 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rab43Q8CG50 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.27■□□□□ 0.19
Rab43Q8CG50 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rab43Q8CG50 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
Rab43Q8CG50 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rab43Q8CG50 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rab43Q8CG50 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.26■□□□□ 0.19
Rab43Q8CG50 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab43Q8CG50 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rab43Q8CG50 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rab43Q8CG50 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab43Q8CG50 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab43Q8CG50 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.26■□□□□ 0.19
Rab43Q8CG50 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.26■□□□□ 0.19
Rab43Q8CG50 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rab43Q8CG50 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.26■□□□□ 0.19
Rab43Q8CG50 Gm10052-201ENSMUST00000168019 960 ntBASIC16.26■□□□□ 0.19
Rab43Q8CG50 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rab43Q8CG50 Gm7729-201ENSMUST00000050143 801 ntBASIC16.26■□□□□ 0.19
Rab43Q8CG50 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab43Q8CG50 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rab43Q8CG50 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab43Q8CG50 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab43Q8CG50 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.26■□□□□ 0.19
Rab43Q8CG50 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab43Q8CG50 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab43Q8CG50 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab43Q8CG50 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab43Q8CG50 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab43Q8CG50 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rab43Q8CG50 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.25■□□□□ 0.19
Rab43Q8CG50 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab43Q8CG50 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.25■□□□□ 0.19
Rab43Q8CG50 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Rab43Q8CG50 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.25■□□□□ 0.19
Rab43Q8CG50 Rprl3-201ENSMUST00000157400 290 ntBASIC16.25■□□□□ 0.19
Rab43Q8CG50 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.25■□□□□ 0.19
Rab43Q8CG50 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab43Q8CG50 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab43Q8CG50 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab43Q8CG50 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Rab43Q8CG50 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Rab43Q8CG50 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.25■□□□□ 0.19
Rab43Q8CG50 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab43Q8CG50 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab43Q8CG50 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab43Q8CG50 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab43Q8CG50 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab43Q8CG50 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.24■□□□□ 0.19
Rab43Q8CG50 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab43Q8CG50 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.24■□□□□ 0.19
Rab43Q8CG50 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rab43Q8CG50 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab43Q8CG50 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Rab43Q8CG50 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rab43Q8CG50 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.24■□□□□ 0.19
Rab43Q8CG50 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab43Q8CG50 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.24■□□□□ 0.19
Rab43Q8CG50 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rab43Q8CG50 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab43Q8CG50 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rab43Q8CG50 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab43Q8CG50 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab43Q8CG50 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab43Q8CG50 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms