Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Lrif1Q8CDD9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Lrif1Q8CDD9 Gm15378-201ENSMUST00000121894 207 ntBASIC16.56■□□□□ 0.24
Lrif1Q8CDD9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Lrif1Q8CDD9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Lrif1Q8CDD9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Lrif1Q8CDD9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.56■□□□□ 0.24
Lrif1Q8CDD9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lrif1Q8CDD9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Lrif1Q8CDD9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lrif1Q8CDD9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Lrif1Q8CDD9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lrif1Q8CDD9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lrif1Q8CDD9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Lrif1Q8CDD9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Lrif1Q8CDD9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lrif1Q8CDD9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Lrif1Q8CDD9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lrif1Q8CDD9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lrif1Q8CDD9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lrif1Q8CDD9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Lrif1Q8CDD9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lrif1Q8CDD9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lrif1Q8CDD9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lrif1Q8CDD9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.55■□□□□ 0.24
Lrif1Q8CDD9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lrif1Q8CDD9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lrif1Q8CDD9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Lrif1Q8CDD9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lrif1Q8CDD9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lrif1Q8CDD9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lrif1Q8CDD9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lrif1Q8CDD9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lrif1Q8CDD9 Gm11927-201ENSMUST00000118472 759 ntBASIC16.54■□□□□ 0.24
Lrif1Q8CDD9 Gm6576-201ENSMUST00000169678 883 ntBASIC16.54■□□□□ 0.24
Lrif1Q8CDD9 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.54■□□□□ 0.24
Lrif1Q8CDD9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.54■□□□□ 0.24
Lrif1Q8CDD9 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.54■□□□□ 0.24
Lrif1Q8CDD9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.54■□□□□ 0.24
Lrif1Q8CDD9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Lrif1Q8CDD9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lrif1Q8CDD9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lrif1Q8CDD9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lrif1Q8CDD9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lrif1Q8CDD9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lrif1Q8CDD9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Lrif1Q8CDD9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lrif1Q8CDD9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lrif1Q8CDD9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lrif1Q8CDD9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lrif1Q8CDD9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lrif1Q8CDD9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lrif1Q8CDD9 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lrif1Q8CDD9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lrif1Q8CDD9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Lrif1Q8CDD9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lrif1Q8CDD9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Lrif1Q8CDD9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Lrif1Q8CDD9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lrif1Q8CDD9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lrif1Q8CDD9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.53■□□□□ 0.24
Lrif1Q8CDD9 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lrif1Q8CDD9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lrif1Q8CDD9 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Lrif1Q8CDD9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lrif1Q8CDD9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Lrif1Q8CDD9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.53■□□□□ 0.24
Lrif1Q8CDD9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Lrif1Q8CDD9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.53■□□□□ 0.24
Lrif1Q8CDD9 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.53■□□□□ 0.24
Lrif1Q8CDD9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lrif1Q8CDD9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lrif1Q8CDD9 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lrif1Q8CDD9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lrif1Q8CDD9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lrif1Q8CDD9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lrif1Q8CDD9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lrif1Q8CDD9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lrif1Q8CDD9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Lrif1Q8CDD9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lrif1Q8CDD9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
Lrif1Q8CDD9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lrif1Q8CDD9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lrif1Q8CDD9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lrif1Q8CDD9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lrif1Q8CDD9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.52■□□□□ 0.24
Lrif1Q8CDD9 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.52■□□□□ 0.24
Lrif1Q8CDD9 Gm10252-201ENSMUST00000209541 832 ntBASIC16.52■□□□□ 0.24
Lrif1Q8CDD9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lrif1Q8CDD9 Zfp783-201ENSMUST00000095946 670 ntBASIC16.52■□□□□ 0.24
Lrif1Q8CDD9 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lrif1Q8CDD9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Lrif1Q8CDD9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lrif1Q8CDD9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Lrif1Q8CDD9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Lrif1Q8CDD9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lrif1Q8CDD9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lrif1Q8CDD9 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lrif1Q8CDD9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.51■□□□□ 0.23
Lrif1Q8CDD9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms