Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.51■□□□□ 0.71
Alx1Q8C8B0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Alx1Q8C8B0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Alx1Q8C8B0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Alx1Q8C8B0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Alx1Q8C8B0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Alx1Q8C8B0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Alx1Q8C8B0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Alx1Q8C8B0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Alx1Q8C8B0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Alx1Q8C8B0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Alx1Q8C8B0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Alx1Q8C8B0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Alx1Q8C8B0 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Alx1Q8C8B0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Alx1Q8C8B0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Alx1Q8C8B0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Alx1Q8C8B0 Gm15794-201ENSMUST00000120182 631 ntBASIC19.5■□□□□ 0.71
Alx1Q8C8B0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Alx1Q8C8B0 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.5■□□□□ 0.71
Alx1Q8C8B0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.5■□□□□ 0.71
Alx1Q8C8B0 Gm27704-201ENSMUST00000185094 107 ntBASIC19.5■□□□□ 0.71
Alx1Q8C8B0 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Alx1Q8C8B0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Alx1Q8C8B0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Alx1Q8C8B0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.5■□□□□ 0.71
Alx1Q8C8B0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Alx1Q8C8B0 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.5■□□□□ 0.71
Alx1Q8C8B0 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Alx1Q8C8B0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Alx1Q8C8B0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Alx1Q8C8B0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Alx1Q8C8B0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
Alx1Q8C8B0 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Alx1Q8C8B0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Alx1Q8C8B0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Alx1Q8C8B0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Alx1Q8C8B0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Alx1Q8C8B0 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Alx1Q8C8B0 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Alx1Q8C8B0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Alx1Q8C8B0 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Alx1Q8C8B0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Alx1Q8C8B0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
Alx1Q8C8B0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Alx1Q8C8B0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.49■□□□□ 0.71
Alx1Q8C8B0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Alx1Q8C8B0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.49■□□□□ 0.71
Alx1Q8C8B0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Alx1Q8C8B0 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Alx1Q8C8B0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Alx1Q8C8B0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.49■□□□□ 0.71
Alx1Q8C8B0 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Alx1Q8C8B0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Alx1Q8C8B0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Alx1Q8C8B0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Alx1Q8C8B0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Alx1Q8C8B0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Alx1Q8C8B0 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Alx1Q8C8B0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.48■□□□□ 0.71
Alx1Q8C8B0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Alx1Q8C8B0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Alx1Q8C8B0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Alx1Q8C8B0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Alx1Q8C8B0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Alx1Q8C8B0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Alx1Q8C8B0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Alx1Q8C8B0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.48■□□□□ 0.71
Alx1Q8C8B0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Alx1Q8C8B0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Alx1Q8C8B0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Alx1Q8C8B0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Alx1Q8C8B0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Alx1Q8C8B0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Alx1Q8C8B0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Alx1Q8C8B0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.48■□□□□ 0.71
Alx1Q8C8B0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Alx1Q8C8B0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Alx1Q8C8B0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Alx1Q8C8B0 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Alx1Q8C8B0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Alx1Q8C8B0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Alx1Q8C8B0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Alx1Q8C8B0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Alx1Q8C8B0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Alx1Q8C8B0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Alx1Q8C8B0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Alx1Q8C8B0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Alx1Q8C8B0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Alx1Q8C8B0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.47■□□□□ 0.71
Alx1Q8C8B0 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.47■□□□□ 0.71
Alx1Q8C8B0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.47■□□□□ 0.71
Alx1Q8C8B0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Alx1Q8C8B0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Alx1Q8C8B0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.47■□□□□ 0.71
Alx1Q8C8B0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Alx1Q8C8B0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Alx1Q8C8B0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Alx1Q8C8B0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Alx1Q8C8B0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms