Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Sh3rf3Q8C120 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3rf3Q8C120 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Sh3rf3Q8C120 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Sh3rf3Q8C120 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3rf3Q8C120 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3rf3Q8C120 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3rf3Q8C120 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.42■□□□□ 0.38
Sh3rf3Q8C120 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3rf3Q8C120 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3rf3Q8C120 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3rf3Q8C120 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.42■□□□□ 0.38
Sh3rf3Q8C120 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3rf3Q8C120 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3rf3Q8C120 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3rf3Q8C120 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3rf3Q8C120 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3rf3Q8C120 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3rf3Q8C120 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3rf3Q8C120 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3rf3Q8C120 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3rf3Q8C120 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3rf3Q8C120 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3rf3Q8C120 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3rf3Q8C120 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.41■□□□□ 0.38
Sh3rf3Q8C120 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3rf3Q8C120 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.41■□□□□ 0.38
Sh3rf3Q8C120 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.41■□□□□ 0.38
Sh3rf3Q8C120 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3rf3Q8C120 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Sh3rf3Q8C120 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3rf3Q8C120 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3rf3Q8C120 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3rf3Q8C120 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3rf3Q8C120 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3rf3Q8C120 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3rf3Q8C120 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3rf3Q8C120 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3rf3Q8C120 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3rf3Q8C120 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf3Q8C120 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Sh3rf3Q8C120 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf3Q8C120 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf3Q8C120 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.4■□□□□ 0.38
Sh3rf3Q8C120 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf3Q8C120 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Sh3rf3Q8C120 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf3Q8C120 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf3Q8C120 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.4■□□□□ 0.38
Sh3rf3Q8C120 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf3Q8C120 Gm7889-201ENSMUST00000185591 958 ntBASIC17.4■□□□□ 0.38
Sh3rf3Q8C120 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Sh3rf3Q8C120 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.4■□□□□ 0.38
Sh3rf3Q8C120 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf3Q8C120 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.4■□□□□ 0.38
Sh3rf3Q8C120 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf3Q8C120 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf3Q8C120 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf3Q8C120 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.4■□□□□ 0.38
Sh3rf3Q8C120 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf3Q8C120 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Sh3rf3Q8C120 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf3Q8C120 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf3Q8C120 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3rf3Q8C120 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sh3rf3Q8C120 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Sh3rf3Q8C120 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Sh3rf3Q8C120 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sh3rf3Q8C120 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Sh3rf3Q8C120 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sh3rf3Q8C120 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sh3rf3Q8C120 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sh3rf3Q8C120 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.39■□□□□ 0.37
Sh3rf3Q8C120 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.39■□□□□ 0.37
Sh3rf3Q8C120 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.39■□□□□ 0.37
Sh3rf3Q8C120 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sh3rf3Q8C120 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Sh3rf3Q8C120 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sh3rf3Q8C120 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sh3rf3Q8C120 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sh3rf3Q8C120 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sh3rf3Q8C120 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3rf3Q8C120 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3rf3Q8C120 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3rf3Q8C120 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.38■□□□□ 0.37
Sh3rf3Q8C120 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3rf3Q8C120 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.38■□□□□ 0.37
Sh3rf3Q8C120 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Sh3rf3Q8C120 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Sh3rf3Q8C120 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.38■□□□□ 0.37
Sh3rf3Q8C120 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3rf3Q8C120 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.38■□□□□ 0.37
Sh3rf3Q8C120 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Sh3rf3Q8C120 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.38■□□□□ 0.37
Sh3rf3Q8C120 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3rf3Q8C120 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3rf3Q8C120 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3rf3Q8C120 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Sh3rf3Q8C120 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3rf3Q8C120 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms