Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.93■□□□□ 0.3
Sh3rf2Q8BZT2 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf2Q8BZT2 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.93■□□□□ 0.3
Sh3rf2Q8BZT2 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.93■□□□□ 0.3
Sh3rf2Q8BZT2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf2Q8BZT2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf2Q8BZT2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf2Q8BZT2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf2Q8BZT2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf2Q8BZT2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf2Q8BZT2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf2Q8BZT2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf2Q8BZT2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf2Q8BZT2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf2Q8BZT2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf2Q8BZT2 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.93■□□□□ 0.3
Sh3rf2Q8BZT2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3rf2Q8BZT2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Sh3rf2Q8BZT2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.92■□□□□ 0.3
Sh3rf2Q8BZT2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3rf2Q8BZT2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3rf2Q8BZT2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3rf2Q8BZT2 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3rf2Q8BZT2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3rf2Q8BZT2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3rf2Q8BZT2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Sh3rf2Q8BZT2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Sh3rf2Q8BZT2 Gm7461-201ENSMUST00000058918 827 ntBASIC16.92■□□□□ 0.3
Sh3rf2Q8BZT2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3rf2Q8BZT2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Sh3rf2Q8BZT2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3rf2Q8BZT2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.92■□□□□ 0.3
Sh3rf2Q8BZT2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3rf2Q8BZT2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3rf2Q8BZT2 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3rf2Q8BZT2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3rf2Q8BZT2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3rf2Q8BZT2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3rf2Q8BZT2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3rf2Q8BZT2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3rf2Q8BZT2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3rf2Q8BZT2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3rf2Q8BZT2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3rf2Q8BZT2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3rf2Q8BZT2 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3rf2Q8BZT2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Sh3rf2Q8BZT2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Sh3rf2Q8BZT2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3rf2Q8BZT2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3rf2Q8BZT2 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.91■□□□□ 0.3
Sh3rf2Q8BZT2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Sh3rf2Q8BZT2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3rf2Q8BZT2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3rf2Q8BZT2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3rf2Q8BZT2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3rf2Q8BZT2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Sh3rf2Q8BZT2 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3rf2Q8BZT2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3rf2Q8BZT2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3rf2Q8BZT2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.9■□□□□ 0.3
Sh3rf2Q8BZT2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3rf2Q8BZT2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3rf2Q8BZT2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3rf2Q8BZT2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Sh3rf2Q8BZT2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.9■□□□□ 0.3
Sh3rf2Q8BZT2 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Sh3rf2Q8BZT2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.9■□□□□ 0.3
Sh3rf2Q8BZT2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.9■□□□□ 0.3
Sh3rf2Q8BZT2 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Sh3rf2Q8BZT2 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3rf2Q8BZT2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3rf2Q8BZT2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3rf2Q8BZT2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3rf2Q8BZT2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3rf2Q8BZT2 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sh3rf2Q8BZT2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sh3rf2Q8BZT2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Sh3rf2Q8BZT2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sh3rf2Q8BZT2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sh3rf2Q8BZT2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sh3rf2Q8BZT2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sh3rf2Q8BZT2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sh3rf2Q8BZT2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sh3rf2Q8BZT2 Gm12895-201ENSMUST00000122214 226 ntBASIC16.89■□□□□ 0.29
Sh3rf2Q8BZT2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.89■□□□□ 0.29
Sh3rf2Q8BZT2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sh3rf2Q8BZT2 Gm34391-201ENSMUST00000203706 907 ntBASIC16.89■□□□□ 0.29
Sh3rf2Q8BZT2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sh3rf2Q8BZT2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sh3rf2Q8BZT2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sh3rf2Q8BZT2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sh3rf2Q8BZT2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sh3rf2Q8BZT2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sh3rf2Q8BZT2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sh3rf2Q8BZT2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Sh3rf2Q8BZT2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Sh3rf2Q8BZT2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sh3rf2Q8BZT2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.88■□□□□ 0.29
Sh3rf2Q8BZT2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sh3rf2Q8BZT2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms