Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC22.9■■□□□ 1.26
Usp40Q8BWR4 Slc35b2-202ENSMUST00000223987 1766 ntBASIC22.9■■□□□ 1.26
Usp40Q8BWR4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC22.9■■□□□ 1.26
Usp40Q8BWR4 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Usp40Q8BWR4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Usp40Q8BWR4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC22.9■■□□□ 1.26
Usp40Q8BWR4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Usp40Q8BWR4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Usp40Q8BWR4 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Usp40Q8BWR4 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Usp40Q8BWR4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Usp40Q8BWR4 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
Usp40Q8BWR4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Usp40Q8BWR4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
Usp40Q8BWR4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Usp40Q8BWR4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
Usp40Q8BWR4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Usp40Q8BWR4 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
Usp40Q8BWR4 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
Usp40Q8BWR4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Usp40Q8BWR4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC22.88■■□□□ 1.25
Usp40Q8BWR4 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Usp40Q8BWR4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
Usp40Q8BWR4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC22.88■■□□□ 1.25
Usp40Q8BWR4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Usp40Q8BWR4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Usp40Q8BWR4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Usp40Q8BWR4 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Usp40Q8BWR4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC22.88■■□□□ 1.25
Usp40Q8BWR4 Gm44454-201ENSMUST00000198541 138 ntBASIC22.88■■□□□ 1.25
Usp40Q8BWR4 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC22.88■■□□□ 1.25
Usp40Q8BWR4 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Usp40Q8BWR4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Usp40Q8BWR4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Usp40Q8BWR4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC22.88■■□□□ 1.25
Usp40Q8BWR4 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Usp40Q8BWR4 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Usp40Q8BWR4 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Usp40Q8BWR4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Usp40Q8BWR4 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC22.87■■□□□ 1.25
Usp40Q8BWR4 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Usp40Q8BWR4 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC22.87■■□□□ 1.25
Usp40Q8BWR4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC22.87■■□□□ 1.25
Usp40Q8BWR4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Usp40Q8BWR4 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Usp40Q8BWR4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Usp40Q8BWR4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Usp40Q8BWR4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Usp40Q8BWR4 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Usp40Q8BWR4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Usp40Q8BWR4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Usp40Q8BWR4 Gm37811-201ENSMUST00000192416 2601 ntBASIC22.86■■□□□ 1.25
Usp40Q8BWR4 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC22.86■■□□□ 1.25
Usp40Q8BWR4 Gm15165-201ENSMUST00000118140 502 ntBASIC22.86■■□□□ 1.25
Usp40Q8BWR4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC22.86■■□□□ 1.25
Usp40Q8BWR4 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Usp40Q8BWR4 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Usp40Q8BWR4 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC22.86■■□□□ 1.25
Usp40Q8BWR4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC22.86■■□□□ 1.25
Usp40Q8BWR4 AC160338.1-201ENSMUST00000214232 705 ntBASIC22.86■■□□□ 1.25
Usp40Q8BWR4 Cmtm5-203ENSMUST00000227441 610 ntBASIC22.86■■□□□ 1.25
Usp40Q8BWR4 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Usp40Q8BWR4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Usp40Q8BWR4 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Usp40Q8BWR4 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Usp40Q8BWR4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Usp40Q8BWR4 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Usp40Q8BWR4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Usp40Q8BWR4 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Usp40Q8BWR4 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Usp40Q8BWR4 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Usp40Q8BWR4 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC22.85■■□□□ 1.25
Usp40Q8BWR4 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Usp40Q8BWR4 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Usp40Q8BWR4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Usp40Q8BWR4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Usp40Q8BWR4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Usp40Q8BWR4 Gm44832-201ENSMUST00000208849 2303 ntBASIC22.85■■□□□ 1.25
Usp40Q8BWR4 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Usp40Q8BWR4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Usp40Q8BWR4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
Usp40Q8BWR4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC22.84■■□□□ 1.25
Usp40Q8BWR4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Usp40Q8BWR4 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC22.84■■□□□ 1.25
Usp40Q8BWR4 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Usp40Q8BWR4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC22.84■■□□□ 1.25
Usp40Q8BWR4 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Usp40Q8BWR4 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Usp40Q8BWR4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Usp40Q8BWR4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC22.83■■□□□ 1.25
Usp40Q8BWR4 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
Usp40Q8BWR4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC22.83■■□□□ 1.25
Usp40Q8BWR4 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Usp40Q8BWR4 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Usp40Q8BWR4 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Usp40Q8BWR4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Usp40Q8BWR4 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Usp40Q8BWR4 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Usp40Q8BWR4 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Usp40Q8BWR4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms