Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Scfd1Q8BRF7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scfd1Q8BRF7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Scfd1Q8BRF7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scfd1Q8BRF7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Scfd1Q8BRF7 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scfd1Q8BRF7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scfd1Q8BRF7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Scfd1Q8BRF7 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scfd1Q8BRF7 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scfd1Q8BRF7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scfd1Q8BRF7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.09■□□□□ 0.65
Scfd1Q8BRF7 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Scfd1Q8BRF7 Gm13312-201ENSMUST00000119631 718 ntBASIC19.09■□□□□ 0.65
Scfd1Q8BRF7 Gm15372-201ENSMUST00000120729 834 ntBASIC19.09■□□□□ 0.65
Scfd1Q8BRF7 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scfd1Q8BRF7 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.09■□□□□ 0.65
Scfd1Q8BRF7 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.09■□□□□ 0.65
Scfd1Q8BRF7 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Scfd1Q8BRF7 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scfd1Q8BRF7 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Scfd1Q8BRF7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scfd1Q8BRF7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scfd1Q8BRF7 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.09■□□□□ 0.65
Scfd1Q8BRF7 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scfd1Q8BRF7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Scfd1Q8BRF7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Scfd1Q8BRF7 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Scfd1Q8BRF7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
Scfd1Q8BRF7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Scfd1Q8BRF7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Scfd1Q8BRF7 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Scfd1Q8BRF7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Scfd1Q8BRF7 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Scfd1Q8BRF7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Scfd1Q8BRF7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
Scfd1Q8BRF7 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.64
Scfd1Q8BRF7 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.64
Scfd1Q8BRF7 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.64
Scfd1Q8BRF7 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.08■□□□□ 0.64
Scfd1Q8BRF7 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scfd1Q8BRF7 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Scfd1Q8BRF7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.08■□□□□ 0.64
Scfd1Q8BRF7 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scfd1Q8BRF7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scfd1Q8BRF7 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scfd1Q8BRF7 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Scfd1Q8BRF7 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scfd1Q8BRF7 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.07■□□□□ 0.64
Scfd1Q8BRF7 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.07■□□□□ 0.64
Scfd1Q8BRF7 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.07■□□□□ 0.64
Scfd1Q8BRF7 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scfd1Q8BRF7 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.07■□□□□ 0.64
Scfd1Q8BRF7 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scfd1Q8BRF7 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Scfd1Q8BRF7 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scfd1Q8BRF7 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Scfd1Q8BRF7 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scfd1Q8BRF7 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scfd1Q8BRF7 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Scfd1Q8BRF7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Scfd1Q8BRF7 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Scfd1Q8BRF7 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scfd1Q8BRF7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Scfd1Q8BRF7 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scfd1Q8BRF7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scfd1Q8BRF7 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scfd1Q8BRF7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scfd1Q8BRF7 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scfd1Q8BRF7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scfd1Q8BRF7 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.06■□□□□ 0.64
Scfd1Q8BRF7 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.06■□□□□ 0.64
Scfd1Q8BRF7 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scfd1Q8BRF7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scfd1Q8BRF7 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scfd1Q8BRF7 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.06■□□□□ 0.64
Scfd1Q8BRF7 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Scfd1Q8BRF7 Gm7461-201ENSMUST00000058918 827 ntBASIC19.06■□□□□ 0.64
Scfd1Q8BRF7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Scfd1Q8BRF7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Scfd1Q8BRF7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
Scfd1Q8BRF7 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Scfd1Q8BRF7 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scfd1Q8BRF7 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scfd1Q8BRF7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scfd1Q8BRF7 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scfd1Q8BRF7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Scfd1Q8BRF7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scfd1Q8BRF7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.05■□□□□ 0.64
Scfd1Q8BRF7 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Scfd1Q8BRF7 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scfd1Q8BRF7 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Scfd1Q8BRF7 Rprl3-201ENSMUST00000157400 290 ntBASIC19.05■□□□□ 0.64
Scfd1Q8BRF7 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.05■□□□□ 0.64
Scfd1Q8BRF7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scfd1Q8BRF7 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.05■□□□□ 0.64
Scfd1Q8BRF7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scfd1Q8BRF7 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scfd1Q8BRF7 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scfd1Q8BRF7 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms