Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm5417-201ENSMUST00000079706 384 ntBASIC15.7■□□□□ 0.1
Clrn3Q8BHH8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clrn3Q8BHH8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clrn3Q8BHH8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clrn3Q8BHH8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Clrn3Q8BHH8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clrn3Q8BHH8 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Clrn3Q8BHH8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clrn3Q8BHH8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clrn3Q8BHH8 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clrn3Q8BHH8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clrn3Q8BHH8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Clrn3Q8BHH8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clrn3Q8BHH8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Clrn3Q8BHH8 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clrn3Q8BHH8 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Clrn3Q8BHH8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clrn3Q8BHH8 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.69■□□□□ 0.1
Clrn3Q8BHH8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clrn3Q8BHH8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.69■□□□□ 0.1
Clrn3Q8BHH8 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clrn3Q8BHH8 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clrn3Q8BHH8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Clrn3Q8BHH8 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Clrn3Q8BHH8 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clrn3Q8BHH8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.69■□□□□ 0.1
Clrn3Q8BHH8 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clrn3Q8BHH8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clrn3Q8BHH8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Clrn3Q8BHH8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clrn3Q8BHH8 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clrn3Q8BHH8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clrn3Q8BHH8 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clrn3Q8BHH8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Clrn3Q8BHH8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clrn3Q8BHH8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clrn3Q8BHH8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clrn3Q8BHH8 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clrn3Q8BHH8 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clrn3Q8BHH8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clrn3Q8BHH8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clrn3Q8BHH8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clrn3Q8BHH8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clrn3Q8BHH8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clrn3Q8BHH8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clrn3Q8BHH8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clrn3Q8BHH8 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clrn3Q8BHH8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clrn3Q8BHH8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clrn3Q8BHH8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clrn3Q8BHH8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clrn3Q8BHH8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clrn3Q8BHH8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clrn3Q8BHH8 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clrn3Q8BHH8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clrn3Q8BHH8 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clrn3Q8BHH8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Clrn3Q8BHH8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clrn3Q8BHH8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clrn3Q8BHH8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clrn3Q8BHH8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Clrn3Q8BHH8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clrn3Q8BHH8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clrn3Q8BHH8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clrn3Q8BHH8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clrn3Q8BHH8 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clrn3Q8BHH8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.67■□□□□ 0.1
Clrn3Q8BHH8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Clrn3Q8BHH8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.67■□□□□ 0.1
Clrn3Q8BHH8 Gm7791-201ENSMUST00000219066 539 ntBASIC15.67■□□□□ 0.1
Clrn3Q8BHH8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clrn3Q8BHH8 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Clrn3Q8BHH8 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clrn3Q8BHH8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clrn3Q8BHH8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clrn3Q8BHH8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clrn3Q8BHH8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clrn3Q8BHH8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clrn3Q8BHH8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clrn3Q8BHH8 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Clrn3Q8BHH8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clrn3Q8BHH8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clrn3Q8BHH8 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clrn3Q8BHH8 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clrn3Q8BHH8 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clrn3Q8BHH8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clrn3Q8BHH8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clrn3Q8BHH8 Gm30025-201ENSMUST00000218555 728 ntBASIC15.66■□□□□ 0.1
Clrn3Q8BHH8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Clrn3Q8BHH8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clrn3Q8BHH8 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clrn3Q8BHH8 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clrn3Q8BHH8 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Clrn3Q8BHH8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clrn3Q8BHH8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.66■□□□□ 0.1
Clrn3Q8BHH8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.66■□□□□ 0.1
Clrn3Q8BHH8 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clrn3Q8BHH8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clrn3Q8BHH8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clrn3Q8BHH8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms