Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubp1Q811S7 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Ubp1Q811S7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubp1Q811S7 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubp1Q811S7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.49■□□□□ 0.23
Ubp1Q811S7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ubp1Q811S7 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.49■□□□□ 0.23
Ubp1Q811S7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubp1Q811S7 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Ubp1Q811S7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ubp1Q811S7 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
Ubp1Q811S7 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ubp1Q811S7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubp1Q811S7 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubp1Q811S7 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubp1Q811S7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ubp1Q811S7 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ubp1Q811S7 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.48■□□□□ 0.23
Ubp1Q811S7 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.48■□□□□ 0.23
Ubp1Q811S7 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.48■□□□□ 0.23
Ubp1Q811S7 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubp1Q811S7 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.48■□□□□ 0.23
Ubp1Q811S7 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubp1Q811S7 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubp1Q811S7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubp1Q811S7 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubp1Q811S7 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubp1Q811S7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubp1Q811S7 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubp1Q811S7 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubp1Q811S7 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubp1Q811S7 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Ubp1Q811S7 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubp1Q811S7 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubp1Q811S7 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Ubp1Q811S7 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.47■□□□□ 0.23
Ubp1Q811S7 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Ubp1Q811S7 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubp1Q811S7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubp1Q811S7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.47■□□□□ 0.23
Ubp1Q811S7 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Ubp1Q811S7 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ubp1Q811S7 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.47■□□□□ 0.23
Ubp1Q811S7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Ubp1Q811S7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.47■□□□□ 0.23
Ubp1Q811S7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubp1Q811S7 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ubp1Q811S7 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ubp1Q811S7 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ubp1Q811S7 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ubp1Q811S7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ubp1Q811S7 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ubp1Q811S7 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ubp1Q811S7 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ubp1Q811S7 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ubp1Q811S7 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ubp1Q811S7 Gm22697-201ENSMUST00000175194 63 ntBASIC16.46■□□□□ 0.23
Ubp1Q811S7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ubp1Q811S7 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ubp1Q811S7 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ubp1Q811S7 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Ubp1Q811S7 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ubp1Q811S7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ubp1Q811S7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.46■□□□□ 0.23
Ubp1Q811S7 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.46■□□□□ 0.23
Ubp1Q811S7 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ubp1Q811S7 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Ubp1Q811S7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubp1Q811S7 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubp1Q811S7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ubp1Q811S7 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubp1Q811S7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Ubp1Q811S7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.45■□□□□ 0.22
Ubp1Q811S7 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubp1Q811S7 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ubp1Q811S7 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Ubp1Q811S7 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.45■□□□□ 0.22
Ubp1Q811S7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Ubp1Q811S7 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.45■□□□□ 0.22
Ubp1Q811S7 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.45■□□□□ 0.22
Ubp1Q811S7 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubp1Q811S7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubp1Q811S7 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Ubp1Q811S7 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Ubp1Q811S7 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubp1Q811S7 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubp1Q811S7 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubp1Q811S7 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubp1Q811S7 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ubp1Q811S7 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubp1Q811S7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ubp1Q811S7 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubp1Q811S7 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ubp1Q811S7 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.44■□□□□ 0.22
Ubp1Q811S7 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ubp1Q811S7 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.44■□□□□ 0.22
Ubp1Q811S7 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Ubp1Q811S7 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ubp1Q811S7 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ubp1Q811S7 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms