Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp6nlQ80XC3 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp6nlQ80XC3 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp6nlQ80XC3 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp6nlQ80XC3 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp6nlQ80XC3 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Usp6nlQ80XC3 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Usp6nlQ80XC3 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Usp6nlQ80XC3 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp6nlQ80XC3 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp6nlQ80XC3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp6nlQ80XC3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp6nlQ80XC3 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp6nlQ80XC3 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp6nlQ80XC3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Usp6nlQ80XC3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Usp6nlQ80XC3 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Usp6nlQ80XC3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp6nlQ80XC3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Usp6nlQ80XC3 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Usp6nlQ80XC3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Usp6nlQ80XC3 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.41■□□□□ 0.54
Usp6nlQ80XC3 Gm27867-201ENSMUST00000184778 125 ntBASIC18.41■□□□□ 0.54
Usp6nlQ80XC3 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Usp6nlQ80XC3 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp6nlQ80XC3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.41■□□□□ 0.54
Usp6nlQ80XC3 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.41■□□□□ 0.54
Usp6nlQ80XC3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp6nlQ80XC3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Usp6nlQ80XC3 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp6nlQ80XC3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp6nlQ80XC3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp6nlQ80XC3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp6nlQ80XC3 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp6nlQ80XC3 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp6nlQ80XC3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp6nlQ80XC3 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Usp6nlQ80XC3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Usp6nlQ80XC3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp6nlQ80XC3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp6nlQ80XC3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp6nlQ80XC3 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Usp6nlQ80XC3 Gm15165-201ENSMUST00000118140 502 ntBASIC18.4■□□□□ 0.54
Usp6nlQ80XC3 Gm7862-201ENSMUST00000121461 292 ntBASIC18.4■□□□□ 0.54
Usp6nlQ80XC3 Gm44454-201ENSMUST00000198541 138 ntBASIC18.4■□□□□ 0.54
Usp6nlQ80XC3 Gm44430-201ENSMUST00000203376 995 ntBASIC18.4■□□□□ 0.54
Usp6nlQ80XC3 Gm2651-201ENSMUST00000203560 838 ntBASIC18.4■□□□□ 0.54
Usp6nlQ80XC3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp6nlQ80XC3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp6nlQ80XC3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Usp6nlQ80XC3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp6nlQ80XC3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp6nlQ80XC3 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Usp6nlQ80XC3 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp6nlQ80XC3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Usp6nlQ80XC3 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Usp6nlQ80XC3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp6nlQ80XC3 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Usp6nlQ80XC3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Usp6nlQ80XC3 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Usp6nlQ80XC3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Usp6nlQ80XC3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp6nlQ80XC3 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Usp6nlQ80XC3 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp6nlQ80XC3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp6nlQ80XC3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp6nlQ80XC3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Usp6nlQ80XC3 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Usp6nlQ80XC3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp6nlQ80XC3 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.39■□□□□ 0.53
Usp6nlQ80XC3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.39■□□□□ 0.53
Usp6nlQ80XC3 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.39■□□□□ 0.53
Usp6nlQ80XC3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp6nlQ80XC3 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp6nlQ80XC3 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp6nlQ80XC3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp6nlQ80XC3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp6nlQ80XC3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp6nlQ80XC3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp6nlQ80XC3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Usp6nlQ80XC3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp6nlQ80XC3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp6nlQ80XC3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp6nlQ80XC3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Usp6nlQ80XC3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp6nlQ80XC3 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.38■□□□□ 0.53
Usp6nlQ80XC3 Gm44357-201ENSMUST00000195897 142 ntBASIC18.38■□□□□ 0.53
Usp6nlQ80XC3 Gm19658-201ENSMUST00000196231 138 ntBASIC18.38■□□□□ 0.53
Usp6nlQ80XC3 Gm44367-201ENSMUST00000196836 138 ntBASIC18.38■□□□□ 0.53
Usp6nlQ80XC3 Gm44350-201ENSMUST00000197197 138 ntBASIC18.38■□□□□ 0.53
Usp6nlQ80XC3 Gm44390-201ENSMUST00000197533 144 ntBASIC18.38■□□□□ 0.53
Usp6nlQ80XC3 Gm44313-201ENSMUST00000198018 138 ntBASIC18.38■□□□□ 0.53
Usp6nlQ80XC3 Gm44486-201ENSMUST00000198508 138 ntBASIC18.38■□□□□ 0.53
Usp6nlQ80XC3 Gm44314-201ENSMUST00000199263 138 ntBASIC18.38■□□□□ 0.53
Usp6nlQ80XC3 Gm44394-201ENSMUST00000199558 138 ntBASIC18.38■□□□□ 0.53
Usp6nlQ80XC3 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.38■□□□□ 0.53
Usp6nlQ80XC3 Gm44484-201ENSMUST00000199873 138 ntBASIC18.38■□□□□ 0.53
Usp6nlQ80XC3 Gm44466-201ENSMUST00000200264 138 ntBASIC18.38■□□□□ 0.53
Usp6nlQ80XC3 Gm44359-201ENSMUST00000200671 138 ntBASIC18.38■□□□□ 0.53
Usp6nlQ80XC3 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms