Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh8Q7TSK3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pcdh8Q7TSK3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh8Q7TSK3 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdh8Q7TSK3 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh8Q7TSK3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh8Q7TSK3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh8Q7TSK3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh8Q7TSK3 Gm27741-201ENSMUST00000185060 237 ntBASIC16.51■□□□□ 0.23
Pcdh8Q7TSK3 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh8Q7TSK3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh8Q7TSK3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pcdh8Q7TSK3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh8Q7TSK3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh8Q7TSK3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Pcdh8Q7TSK3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh8Q7TSK3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh8Q7TSK3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh8Q7TSK3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh8Q7TSK3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh8Q7TSK3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh8Q7TSK3 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh8Q7TSK3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Pcdh8Q7TSK3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh8Q7TSK3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdh8Q7TSK3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh8Q7TSK3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh8Q7TSK3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.5■□□□□ 0.23
Pcdh8Q7TSK3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh8Q7TSK3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdh8Q7TSK3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pcdh8Q7TSK3 Mir770-201ENSMUST00000103252 94 ntBASIC16.5■□□□□ 0.23
Pcdh8Q7TSK3 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.5■□□□□ 0.23
Pcdh8Q7TSK3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdh8Q7TSK3 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Pcdh8Q7TSK3 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pcdh8Q7TSK3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pcdh8Q7TSK3 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.5■□□□□ 0.23
Pcdh8Q7TSK3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.5■□□□□ 0.23
Pcdh8Q7TSK3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdh8Q7TSK3 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh8Q7TSK3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh8Q7TSK3 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh8Q7TSK3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdh8Q7TSK3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pcdh8Q7TSK3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh8Q7TSK3 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh8Q7TSK3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh8Q7TSK3 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh8Q7TSK3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdh8Q7TSK3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh8Q7TSK3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Pcdh8Q7TSK3 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh8Q7TSK3 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.49■□□□□ 0.23
Pcdh8Q7TSK3 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Pcdh8Q7TSK3 Gm17807-201ENSMUST00000186869 298 ntBASIC16.49■□□□□ 0.23
Pcdh8Q7TSK3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Pcdh8Q7TSK3 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Pcdh8Q7TSK3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh8Q7TSK3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh8Q7TSK3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh8Q7TSK3 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh8Q7TSK3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Pcdh8Q7TSK3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh8Q7TSK3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdh8Q7TSK3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.49■□□□□ 0.23
Pcdh8Q7TSK3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh8Q7TSK3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh8Q7TSK3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdh8Q7TSK3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh8Q7TSK3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh8Q7TSK3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.48■□□□□ 0.23
Pcdh8Q7TSK3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh8Q7TSK3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Pcdh8Q7TSK3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh8Q7TSK3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh8Q7TSK3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.48■□□□□ 0.23
Pcdh8Q7TSK3 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh8Q7TSK3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.48■□□□□ 0.23
Pcdh8Q7TSK3 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Pcdh8Q7TSK3 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh8Q7TSK3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh8Q7TSK3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh8Q7TSK3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdh8Q7TSK3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh8Q7TSK3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh8Q7TSK3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdh8Q7TSK3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdh8Q7TSK3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh8Q7TSK3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh8Q7TSK3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pcdh8Q7TSK3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh8Q7TSK3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh8Q7TSK3 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Pcdh8Q7TSK3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh8Q7TSK3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh8Q7TSK3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Pcdh8Q7TSK3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh8Q7TSK3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Pcdh8Q7TSK3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms