Protein–RNA interactions for Protein: Q6S5L9

Shc4, SHC-transforming protein 4, mousemouse

Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc4Q6S5L9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Shc4Q6S5L9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.66■□□□□ 0.1
Shc4Q6S5L9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.65■□□□□ 0.1
Shc4Q6S5L9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shc4Q6S5L9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shc4Q6S5L9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shc4Q6S5L9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Shc4Q6S5L9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Shc4Q6S5L9 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Shc4Q6S5L9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shc4Q6S5L9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Shc4Q6S5L9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Shc4Q6S5L9 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shc4Q6S5L9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shc4Q6S5L9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Shc4Q6S5L9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Shc4Q6S5L9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shc4Q6S5L9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Shc4Q6S5L9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shc4Q6S5L9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shc4Q6S5L9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.64■□□□□ 0.09
Shc4Q6S5L9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Shc4Q6S5L9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.64■□□□□ 0.09
Shc4Q6S5L9 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.64■□□□□ 0.09
Shc4Q6S5L9 Gm17808-201ENSMUST00000200859 894 ntBASIC15.64■□□□□ 0.09
Shc4Q6S5L9 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shc4Q6S5L9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Shc4Q6S5L9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shc4Q6S5L9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shc4Q6S5L9 Gm10566-201ENSMUST00000086739 996 ntBASIC15.64■□□□□ 0.09
Shc4Q6S5L9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shc4Q6S5L9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Shc4Q6S5L9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Shc4Q6S5L9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shc4Q6S5L9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shc4Q6S5L9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.64■□□□□ 0.09
Shc4Q6S5L9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shc4Q6S5L9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Shc4Q6S5L9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shc4Q6S5L9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shc4Q6S5L9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Shc4Q6S5L9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shc4Q6S5L9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shc4Q6S5L9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shc4Q6S5L9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.63■□□□□ 0.09
Shc4Q6S5L9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shc4Q6S5L9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Shc4Q6S5L9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shc4Q6S5L9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.63■□□□□ 0.09
Shc4Q6S5L9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shc4Q6S5L9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Shc4Q6S5L9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Shc4Q6S5L9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shc4Q6S5L9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shc4Q6S5L9 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shc4Q6S5L9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shc4Q6S5L9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shc4Q6S5L9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Shc4Q6S5L9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Shc4Q6S5L9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Shc4Q6S5L9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Shc4Q6S5L9 Actl10-202ENSMUST00000226583 1501 ntBASIC15.63■□□□□ 0.09
Shc4Q6S5L9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shc4Q6S5L9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Shc4Q6S5L9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shc4Q6S5L9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shc4Q6S5L9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shc4Q6S5L9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shc4Q6S5L9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Shc4Q6S5L9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shc4Q6S5L9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Shc4Q6S5L9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shc4Q6S5L9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shc4Q6S5L9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Shc4Q6S5L9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shc4Q6S5L9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shc4Q6S5L9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Shc4Q6S5L9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Shc4Q6S5L9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.62■□□□□ 0.09
Shc4Q6S5L9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Shc4Q6S5L9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.62■□□□□ 0.09
Shc4Q6S5L9 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.62■□□□□ 0.09
Shc4Q6S5L9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Shc4Q6S5L9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Shc4Q6S5L9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shc4Q6S5L9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shc4Q6S5L9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shc4Q6S5L9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Shc4Q6S5L9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shc4Q6S5L9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Shc4Q6S5L9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shc4Q6S5L9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.61■□□□□ 0.09
Shc4Q6S5L9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shc4Q6S5L9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
Shc4Q6S5L9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.61■□□□□ 0.09
Shc4Q6S5L9 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.61■□□□□ 0.09
Shc4Q6S5L9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shc4Q6S5L9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Shc4Q6S5L9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shc4Q6S5L9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms