Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcc2Q6PDG5 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Smarcc2Q6PDG5 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcc2Q6PDG5 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcc2Q6PDG5 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcc2Q6PDG5 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcc2Q6PDG5 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcc2Q6PDG5 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Smarcc2Q6PDG5 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.51■□□□□ 0.71
Smarcc2Q6PDG5 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcc2Q6PDG5 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcc2Q6PDG5 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcc2Q6PDG5 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcc2Q6PDG5 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcc2Q6PDG5 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcc2Q6PDG5 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Smarcc2Q6PDG5 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcc2Q6PDG5 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.5■□□□□ 0.71
Smarcc2Q6PDG5 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcc2Q6PDG5 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Smarcc2Q6PDG5 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Smarcc2Q6PDG5 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcc2Q6PDG5 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Smarcc2Q6PDG5 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Smarcc2Q6PDG5 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Smarcc2Q6PDG5 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcc2Q6PDG5 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Smarcc2Q6PDG5 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.5■□□□□ 0.71
Smarcc2Q6PDG5 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcc2Q6PDG5 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcc2Q6PDG5 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcc2Q6PDG5 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcc2Q6PDG5 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.49■□□□□ 0.71
Smarcc2Q6PDG5 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcc2Q6PDG5 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcc2Q6PDG5 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcc2Q6PDG5 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcc2Q6PDG5 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Smarcc2Q6PDG5 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcc2Q6PDG5 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcc2Q6PDG5 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Smarcc2Q6PDG5 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcc2Q6PDG5 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcc2Q6PDG5 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcc2Q6PDG5 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.48■□□□□ 0.71
Smarcc2Q6PDG5 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcc2Q6PDG5 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Smarcc2Q6PDG5 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Smarcc2Q6PDG5 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Smarcc2Q6PDG5 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcc2Q6PDG5 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcc2Q6PDG5 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcc2Q6PDG5 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.48■□□□□ 0.71
Smarcc2Q6PDG5 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.48■□□□□ 0.71
Smarcc2Q6PDG5 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcc2Q6PDG5 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Smarcc2Q6PDG5 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcc2Q6PDG5 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcc2Q6PDG5 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcc2Q6PDG5 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcc2Q6PDG5 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcc2Q6PDG5 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc2Q6PDG5 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.47■□□□□ 0.71
Smarcc2Q6PDG5 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.47■□□□□ 0.71
Smarcc2Q6PDG5 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc2Q6PDG5 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc2Q6PDG5 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
Smarcc2Q6PDG5 Gm13474-201ENSMUST00000122466 815 ntBASIC19.47■□□□□ 0.71
Smarcc2Q6PDG5 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc2Q6PDG5 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc2Q6PDG5 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc2Q6PDG5 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Smarcc2Q6PDG5 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
Smarcc2Q6PDG5 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc2Q6PDG5 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc2Q6PDG5 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.47■□□□□ 0.71
Smarcc2Q6PDG5 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc2Q6PDG5 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc2Q6PDG5 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcc2Q6PDG5 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcc2Q6PDG5 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.46■□□□□ 0.71
Smarcc2Q6PDG5 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcc2Q6PDG5 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.46■□□□□ 0.71
Smarcc2Q6PDG5 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcc2Q6PDG5 Gm18958-201ENSMUST00000174258 762 ntBASIC19.46■□□□□ 0.71
Smarcc2Q6PDG5 Gm7370-201ENSMUST00000219471 767 ntBASIC19.46■□□□□ 0.71
Smarcc2Q6PDG5 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcc2Q6PDG5 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcc2Q6PDG5 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Smarcc2Q6PDG5 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcc2Q6PDG5 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcc2Q6PDG5 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcc2Q6PDG5 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Smarcc2Q6PDG5 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.46■□□□□ 0.71
Smarcc2Q6PDG5 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcc2Q6PDG5 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.46■□□□□ 0.71
Smarcc2Q6PDG5 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Smarcc2Q6PDG5 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcc2Q6PDG5 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcc2Q6PDG5 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms