Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Abcf1Q6P542 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Abcf1Q6P542 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Abcf1Q6P542 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Abcf1Q6P542 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Abcf1Q6P542 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Abcf1Q6P542 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Abcf1Q6P542 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.71■□□□□ 0.59
Abcf1Q6P542 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Abcf1Q6P542 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Abcf1Q6P542 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.71■□□□□ 0.59
Abcf1Q6P542 Gm37292-201ENSMUST00000192062 758 ntBASIC18.71■□□□□ 0.59
Abcf1Q6P542 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.71■□□□□ 0.59
Abcf1Q6P542 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Abcf1Q6P542 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Abcf1Q6P542 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.71■□□□□ 0.59
Abcf1Q6P542 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Abcf1Q6P542 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Abcf1Q6P542 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Abcf1Q6P542 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Abcf1Q6P542 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Abcf1Q6P542 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Abcf1Q6P542 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Abcf1Q6P542 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Abcf1Q6P542 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Abcf1Q6P542 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Abcf1Q6P542 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Abcf1Q6P542 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.71■□□□□ 0.58
Abcf1Q6P542 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcf1Q6P542 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcf1Q6P542 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcf1Q6P542 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcf1Q6P542 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcf1Q6P542 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Abcf1Q6P542 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcf1Q6P542 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcf1Q6P542 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcf1Q6P542 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcf1Q6P542 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.7■□□□□ 0.58
Abcf1Q6P542 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcf1Q6P542 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcf1Q6P542 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.7■□□□□ 0.58
Abcf1Q6P542 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Abcf1Q6P542 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcf1Q6P542 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.7■□□□□ 0.58
Abcf1Q6P542 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcf1Q6P542 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Abcf1Q6P542 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcf1Q6P542 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Abcf1Q6P542 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcf1Q6P542 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.7■□□□□ 0.58
Abcf1Q6P542 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.7■□□□□ 0.58
Abcf1Q6P542 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcf1Q6P542 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcf1Q6P542 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcf1Q6P542 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcf1Q6P542 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcf1Q6P542 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcf1Q6P542 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcf1Q6P542 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.7■□□□□ 0.58
Abcf1Q6P542 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcf1Q6P542 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcf1Q6P542 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Abcf1Q6P542 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.7■□□□□ 0.58
Abcf1Q6P542 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcf1Q6P542 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcf1Q6P542 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Abcf1Q6P542 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abcf1Q6P542 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abcf1Q6P542 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Abcf1Q6P542 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Abcf1Q6P542 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abcf1Q6P542 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abcf1Q6P542 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abcf1Q6P542 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.69■□□□□ 0.58
Abcf1Q6P542 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.69■□□□□ 0.58
Abcf1Q6P542 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abcf1Q6P542 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abcf1Q6P542 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Abcf1Q6P542 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abcf1Q6P542 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.69■□□□□ 0.58
Abcf1Q6P542 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abcf1Q6P542 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abcf1Q6P542 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abcf1Q6P542 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Abcf1Q6P542 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Abcf1Q6P542 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Abcf1Q6P542 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Abcf1Q6P542 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Abcf1Q6P542 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.69■□□□□ 0.58
Abcf1Q6P542 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abcf1Q6P542 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Abcf1Q6P542 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.68■□□□□ 0.58
Abcf1Q6P542 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Abcf1Q6P542 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Abcf1Q6P542 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Abcf1Q6P542 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Abcf1Q6P542 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Abcf1Q6P542 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Abcf1Q6P542 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms