Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retreg2Q6NS82 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retreg2Q6NS82 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retreg2Q6NS82 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Retreg2Q6NS82 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Retreg2Q6NS82 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retreg2Q6NS82 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18■□□□□ 0.47
Retreg2Q6NS82 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retreg2Q6NS82 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retreg2Q6NS82 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18■□□□□ 0.47
Retreg2Q6NS82 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Retreg2Q6NS82 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18■□□□□ 0.47
Retreg2Q6NS82 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retreg2Q6NS82 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18■□□□□ 0.47
Retreg2Q6NS82 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18■□□□□ 0.47
Retreg2Q6NS82 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retreg2Q6NS82 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retreg2Q6NS82 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retreg2Q6NS82 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18■□□□□ 0.47
Retreg2Q6NS82 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retreg2Q6NS82 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Retreg2Q6NS82 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retreg2Q6NS82 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retreg2Q6NS82 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retreg2Q6NS82 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.99■□□□□ 0.47
Retreg2Q6NS82 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retreg2Q6NS82 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retreg2Q6NS82 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retreg2Q6NS82 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.99■□□□□ 0.47
Retreg2Q6NS82 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retreg2Q6NS82 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retreg2Q6NS82 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Retreg2Q6NS82 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.99■□□□□ 0.47
Retreg2Q6NS82 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.99■□□□□ 0.47
Retreg2Q6NS82 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retreg2Q6NS82 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Retreg2Q6NS82 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Retreg2Q6NS82 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retreg2Q6NS82 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Retreg2Q6NS82 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retreg2Q6NS82 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.98■□□□□ 0.47
Retreg2Q6NS82 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retreg2Q6NS82 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retreg2Q6NS82 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retreg2Q6NS82 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Retreg2Q6NS82 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.98■□□□□ 0.47
Retreg2Q6NS82 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retreg2Q6NS82 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retreg2Q6NS82 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retreg2Q6NS82 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retreg2Q6NS82 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Retreg2Q6NS82 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.97■□□□□ 0.47
Retreg2Q6NS82 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retreg2Q6NS82 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retreg2Q6NS82 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retreg2Q6NS82 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Retreg2Q6NS82 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Retreg2Q6NS82 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retreg2Q6NS82 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retreg2Q6NS82 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retreg2Q6NS82 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retreg2Q6NS82 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Retreg2Q6NS82 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.97■□□□□ 0.47
Retreg2Q6NS82 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.97■□□□□ 0.47
Retreg2Q6NS82 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Retreg2Q6NS82 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retreg2Q6NS82 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retreg2Q6NS82 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retreg2Q6NS82 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retreg2Q6NS82 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retreg2Q6NS82 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retreg2Q6NS82 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Retreg2Q6NS82 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Retreg2Q6NS82 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retreg2Q6NS82 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retreg2Q6NS82 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retreg2Q6NS82 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retreg2Q6NS82 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retreg2Q6NS82 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.96■□□□□ 0.47
Retreg2Q6NS82 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retreg2Q6NS82 Gm22697-201ENSMUST00000175194 63 ntBASIC17.96■□□□□ 0.47
Retreg2Q6NS82 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retreg2Q6NS82 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retreg2Q6NS82 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retreg2Q6NS82 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retreg2Q6NS82 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retreg2Q6NS82 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retreg2Q6NS82 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retreg2Q6NS82 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retreg2Q6NS82 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Retreg2Q6NS82 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Retreg2Q6NS82 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Retreg2Q6NS82 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.95■□□□□ 0.46
Retreg2Q6NS82 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Retreg2Q6NS82 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retreg2Q6NS82 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retreg2Q6NS82 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retreg2Q6NS82 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retreg2Q6NS82 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
Retreg2Q6NS82 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms