Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Scube3Q66PY1 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.56■□□□□ 0.4
Scube3Q66PY1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scube3Q66PY1 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scube3Q66PY1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scube3Q66PY1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Scube3Q66PY1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scube3Q66PY1 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scube3Q66PY1 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scube3Q66PY1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scube3Q66PY1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scube3Q66PY1 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scube3Q66PY1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.55■□□□□ 0.4
Scube3Q66PY1 Gm18115-201ENSMUST00000221209 621 ntBASIC17.55■□□□□ 0.4
Scube3Q66PY1 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.55■□□□□ 0.4
Scube3Q66PY1 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scube3Q66PY1 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scube3Q66PY1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Scube3Q66PY1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scube3Q66PY1 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.55■□□□□ 0.4
Scube3Q66PY1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scube3Q66PY1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scube3Q66PY1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scube3Q66PY1 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scube3Q66PY1 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scube3Q66PY1 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scube3Q66PY1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scube3Q66PY1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scube3Q66PY1 Gm9013-201ENSMUST00000132939 882 ntBASIC17.54■□□□□ 0.4
Scube3Q66PY1 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scube3Q66PY1 Gm21362-201ENSMUST00000194272 928 ntBASIC17.54■□□□□ 0.4
Scube3Q66PY1 Gm5587-201ENSMUST00000206270 674 ntBASIC17.54■□□□□ 0.4
Scube3Q66PY1 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.54■□□□□ 0.4
Scube3Q66PY1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scube3Q66PY1 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.54■□□□□ 0.4
Scube3Q66PY1 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scube3Q66PY1 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Scube3Q66PY1 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scube3Q66PY1 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scube3Q66PY1 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scube3Q66PY1 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scube3Q66PY1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scube3Q66PY1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scube3Q66PY1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scube3Q66PY1 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Scube3Q66PY1 Gm25016-201ENSMUST00000158399 131 ntBASIC17.53■□□□□ 0.4
Scube3Q66PY1 Gm6345-202ENSMUST00000180900 204 ntBASIC17.53■□□□□ 0.4
Scube3Q66PY1 Gm44450-201ENSMUST00000199528 114 ntBASIC17.53■□□□□ 0.4
Scube3Q66PY1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scube3Q66PY1 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Scube3Q66PY1 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scube3Q66PY1 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scube3Q66PY1 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.53■□□□□ 0.4
Scube3Q66PY1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Scube3Q66PY1 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scube3Q66PY1 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Scube3Q66PY1 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scube3Q66PY1 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scube3Q66PY1 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scube3Q66PY1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Scube3Q66PY1 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Scube3Q66PY1 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Scube3Q66PY1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scube3Q66PY1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Scube3Q66PY1 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Scube3Q66PY1 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scube3Q66PY1 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Scube3Q66PY1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scube3Q66PY1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scube3Q66PY1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scube3Q66PY1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Scube3Q66PY1 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scube3Q66PY1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scube3Q66PY1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scube3Q66PY1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scube3Q66PY1 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scube3Q66PY1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scube3Q66PY1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.51■□□□□ 0.39
Scube3Q66PY1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scube3Q66PY1 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.51■□□□□ 0.39
Scube3Q66PY1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scube3Q66PY1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scube3Q66PY1 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scube3Q66PY1 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Scube3Q66PY1 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scube3Q66PY1 Gm10819-201ENSMUST00000099988 561 ntBASIC17.51■□□□□ 0.39
Scube3Q66PY1 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scube3Q66PY1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scube3Q66PY1 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scube3Q66PY1 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Scube3Q66PY1 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scube3Q66PY1 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.5■□□□□ 0.39
Scube3Q66PY1 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scube3Q66PY1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scube3Q66PY1 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scube3Q66PY1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Scube3Q66PY1 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scube3Q66PY1 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scube3Q66PY1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scube3Q66PY1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms