Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col7a1Q63870 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.84□□□□□ -0.19
Col7a1Q63870 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.84□□□□□ -0.19
Col7a1Q63870 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.84□□□□□ -0.19
Col7a1Q63870 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col7a1Q63870 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col7a1Q63870 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Col7a1Q63870 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col7a1Q63870 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col7a1Q63870 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Col7a1Q63870 Mir6420-201ENSMUST00000185032 102 ntBASIC13.84□□□□□ -0.19
Col7a1Q63870 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col7a1Q63870 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col7a1Q63870 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col7a1Q63870 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col7a1Q63870 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.84□□□□□ -0.19
Col7a1Q63870 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col7a1Q63870 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col7a1Q63870 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col7a1Q63870 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.84□□□□□ -0.19
Col7a1Q63870 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col7a1Q63870 Gm43630-201ENSMUST00000201550 776 ntBASIC13.84□□□□□ -0.19
Col7a1Q63870 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.84□□□□□ -0.19
Col7a1Q63870 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col7a1Q63870 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Col7a1Q63870 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.19
Col7a1Q63870 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col7a1Q63870 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col7a1Q63870 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col7a1Q63870 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col7a1Q63870 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC13.83□□□□□ -0.2
Col7a1Q63870 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col7a1Q63870 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col7a1Q63870 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.83□□□□□ -0.2
Col7a1Q63870 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.83□□□□□ -0.2
Col7a1Q63870 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.83□□□□□ -0.2
Col7a1Q63870 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col7a1Q63870 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Col7a1Q63870 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col7a1Q63870 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col7a1Q63870 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col7a1Q63870 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col7a1Q63870 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.83□□□□□ -0.2
Col7a1Q63870 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Col7a1Q63870 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col7a1Q63870 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col7a1Q63870 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Col7a1Q63870 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Col7a1Q63870 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col7a1Q63870 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.83□□□□□ -0.2
Col7a1Q63870 Gm13223-201ENSMUST00000118609 747 ntBASIC13.83□□□□□ -0.2
Col7a1Q63870 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.83□□□□□ -0.2
Col7a1Q63870 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col7a1Q63870 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.83□□□□□ -0.2
Col7a1Q63870 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col7a1Q63870 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col7a1Q63870 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col7a1Q63870 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Col7a1Q63870 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col7a1Q63870 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col7a1Q63870 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col7a1Q63870 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.82□□□□□ -0.2
Col7a1Q63870 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.82□□□□□ -0.2
Col7a1Q63870 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.82□□□□□ -0.2
Col7a1Q63870 Gm17271-201ENSMUST00000165535 355 ntBASIC13.82□□□□□ -0.2
Col7a1Q63870 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col7a1Q63870 Gm22175-201ENSMUST00000175007 78 ntBASIC13.82□□□□□ -0.2
Col7a1Q63870 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col7a1Q63870 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col7a1Q63870 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col7a1Q63870 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col7a1Q63870 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.82□□□□□ -0.2
Col7a1Q63870 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col7a1Q63870 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.82□□□□□ -0.2
Col7a1Q63870 Gm4899-201ENSMUST00000178708 719 ntBASIC13.82□□□□□ -0.2
Col7a1Q63870 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.82□□□□□ -0.2
Col7a1Q63870 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col7a1Q63870 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.82□□□□□ -0.2
Col7a1Q63870 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col7a1Q63870 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC13.82□□□□□ -0.2
Col7a1Q63870 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col7a1Q63870 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col7a1Q63870 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col7a1Q63870 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col7a1Q63870 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col7a1Q63870 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Col7a1Q63870 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.81□□□□□ -0.2
Col7a1Q63870 Gm18889-201ENSMUST00000174284 929 ntBASIC13.81□□□□□ -0.2
Col7a1Q63870 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col7a1Q63870 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col7a1Q63870 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Col7a1Q63870 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col7a1Q63870 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col7a1Q63870 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col7a1Q63870 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col7a1Q63870 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col7a1Q63870 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col7a1Q63870 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.81□□□□□ -0.2
Col7a1Q63870 Mir8112-201ENSMUST00000184382 131 ntBASIC13.81□□□□□ -0.2
Col7a1Q63870 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms