Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ctr9Q62018 Gm14859-201ENSMUST00000117752 357 ntBASIC19.71■□□□□ 0.75
Ctr9Q62018 Ank2-226ENSMUST00000189368 339 ntBASIC19.71■□□□□ 0.75
Ctr9Q62018 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ctr9Q62018 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.71■□□□□ 0.75
Ctr9Q62018 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ctr9Q62018 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ctr9Q62018 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ctr9Q62018 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ctr9Q62018 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ctr9Q62018 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ctr9Q62018 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ctr9Q62018 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.71■□□□□ 0.75
Ctr9Q62018 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ctr9Q62018 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ctr9Q62018 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ctr9Q62018 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ctr9Q62018 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.7■□□□□ 0.74
Ctr9Q62018 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ctr9Q62018 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ctr9Q62018 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ctr9Q62018 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ctr9Q62018 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.7■□□□□ 0.74
Ctr9Q62018 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ctr9Q62018 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ctr9Q62018 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ctr9Q62018 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ctr9Q62018 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ctr9Q62018 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ctr9Q62018 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ctr9Q62018 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ctr9Q62018 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ctr9Q62018 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ctr9Q62018 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.69■□□□□ 0.74
Ctr9Q62018 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ctr9Q62018 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ctr9Q62018 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ctr9Q62018 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ctr9Q62018 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ctr9Q62018 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.69■□□□□ 0.74
Ctr9Q62018 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ctr9Q62018 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ctr9Q62018 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ctr9Q62018 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ctr9Q62018 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ctr9Q62018 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ctr9Q62018 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.69■□□□□ 0.74
Ctr9Q62018 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
Ctr9Q62018 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.69■□□□□ 0.74
Ctr9Q62018 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ctr9Q62018 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ctr9Q62018 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ctr9Q62018 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.68■□□□□ 0.74
Ctr9Q62018 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ctr9Q62018 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ctr9Q62018 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ctr9Q62018 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Ctr9Q62018 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ctr9Q62018 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ctr9Q62018 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ctr9Q62018 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.68■□□□□ 0.74
Ctr9Q62018 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Ctr9Q62018 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ctr9Q62018 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ctr9Q62018 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ctr9Q62018 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctr9Q62018 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ctr9Q62018 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Ctr9Q62018 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctr9Q62018 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ctr9Q62018 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.67■□□□□ 0.74
Ctr9Q62018 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.67■□□□□ 0.74
Ctr9Q62018 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctr9Q62018 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.67■□□□□ 0.74
Ctr9Q62018 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctr9Q62018 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctr9Q62018 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctr9Q62018 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ctr9Q62018 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctr9Q62018 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Ctr9Q62018 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Ctr9Q62018 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctr9Q62018 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.67■□□□□ 0.74
Ctr9Q62018 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctr9Q62018 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctr9Q62018 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctr9Q62018 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ctr9Q62018 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctr9Q62018 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctr9Q62018 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ctr9Q62018 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctr9Q62018 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctr9Q62018 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.66■□□□□ 0.74
Ctr9Q62018 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.66■□□□□ 0.74
Ctr9Q62018 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ctr9Q62018 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ctr9Q62018 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctr9Q62018 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ctr9Q62018 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctr9Q62018 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms