Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ift88Q61371 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ift88Q61371 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ift88Q61371 Gm12527-201ENSMUST00000117967 564 ntBASIC18.53■□□□□ 0.56
Ift88Q61371 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ift88Q61371 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ift88Q61371 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ift88Q61371 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ift88Q61371 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ift88Q61371 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ift88Q61371 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ift88Q61371 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ift88Q61371 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ift88Q61371 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ift88Q61371 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ift88Q61371 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.52■□□□□ 0.56
Ift88Q61371 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Ift88Q61371 Gm5643-201ENSMUST00000117081 966 ntBASIC18.52■□□□□ 0.56
Ift88Q61371 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.52■□□□□ 0.56
Ift88Q61371 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.52■□□□□ 0.56
Ift88Q61371 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ift88Q61371 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ift88Q61371 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Ift88Q61371 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ift88Q61371 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Ift88Q61371 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ift88Q61371 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ift88Q61371 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ift88Q61371 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ift88Q61371 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ift88Q61371 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ift88Q61371 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
Ift88Q61371 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Ift88Q61371 Gm15378-201ENSMUST00000121894 207 ntBASIC18.51■□□□□ 0.55
Ift88Q61371 Gm9731-201ENSMUST00000209480 747 ntBASIC18.51■□□□□ 0.55
Ift88Q61371 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ift88Q61371 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ift88Q61371 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ift88Q61371 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ift88Q61371 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ift88Q61371 Dancr-204ENSMUST00000132389 2347 ntBASIC18.51■□□□□ 0.55
Ift88Q61371 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ift88Q61371 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ift88Q61371 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Ift88Q61371 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ift88Q61371 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ift88Q61371 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.5■□□□□ 0.55
Ift88Q61371 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Ift88Q61371 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ift88Q61371 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ift88Q61371 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ift88Q61371 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ift88Q61371 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ift88Q61371 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.5■□□□□ 0.55
Ift88Q61371 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ift88Q61371 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.5■□□□□ 0.55
Ift88Q61371 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ift88Q61371 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Ift88Q61371 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ift88Q61371 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.5■□□□□ 0.55
Ift88Q61371 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.5■□□□□ 0.55
Ift88Q61371 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ift88Q61371 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.5■□□□□ 0.55
Ift88Q61371 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ift88Q61371 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Ift88Q61371 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ift88Q61371 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ift88Q61371 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ift88Q61371 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ift88Q61371 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Ift88Q61371 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ift88Q61371 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ift88Q61371 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ift88Q61371 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ift88Q61371 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ift88Q61371 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ift88Q61371 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ift88Q61371 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.49■□□□□ 0.55
Ift88Q61371 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ift88Q61371 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ift88Q61371 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ift88Q61371 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ift88Q61371 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ift88Q61371 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ift88Q61371 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ift88Q61371 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Ift88Q61371 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ift88Q61371 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Ift88Q61371 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ift88Q61371 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ift88Q61371 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ift88Q61371 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ift88Q61371 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.49■□□□□ 0.55
Ift88Q61371 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Ift88Q61371 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ift88Q61371 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ift88Q61371 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ift88Q61371 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ift88Q61371 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ift88Q61371 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms