Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Irf9Q61179 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Irf9Q61179 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Irf9Q61179 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Irf9Q61179 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Irf9Q61179 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Irf9Q61179 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Irf9Q61179 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Irf9Q61179 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Irf9Q61179 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Irf9Q61179 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Irf9Q61179 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Irf9Q61179 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Irf9Q61179 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Irf9Q61179 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC20.77■□□□□ 0.92
Irf9Q61179 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Irf9Q61179 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.77■□□□□ 0.92
Irf9Q61179 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Irf9Q61179 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Irf9Q61179 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Irf9Q61179 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Irf9Q61179 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.77■□□□□ 0.92
Irf9Q61179 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.91
Irf9Q61179 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Irf9Q61179 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Irf9Q61179 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Irf9Q61179 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Irf9Q61179 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Irf9Q61179 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Irf9Q61179 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Irf9Q61179 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Irf9Q61179 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Irf9Q61179 Gm15442-201ENSMUST00000117905 1527 ntBASIC20.76■□□□□ 0.91
Irf9Q61179 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Irf9Q61179 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Irf9Q61179 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Irf9Q61179 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Irf9Q61179 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Irf9Q61179 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC20.75■□□□□ 0.91
Irf9Q61179 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Irf9Q61179 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Irf9Q61179 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Irf9Q61179 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Irf9Q61179 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Irf9Q61179 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Irf9Q61179 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Irf9Q61179 Gm7153-201ENSMUST00000117092 455 ntBASIC20.75■□□□□ 0.91
Irf9Q61179 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Irf9Q61179 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Irf9Q61179 Gm10052-201ENSMUST00000168019 960 ntBASIC20.75■□□□□ 0.91
Irf9Q61179 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC20.75■□□□□ 0.91
Irf9Q61179 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Irf9Q61179 Gm7729-201ENSMUST00000050143 801 ntBASIC20.75■□□□□ 0.91
Irf9Q61179 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Irf9Q61179 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Irf9Q61179 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Irf9Q61179 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Irf9Q61179 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Irf9Q61179 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Irf9Q61179 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Irf9Q61179 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Irf9Q61179 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Irf9Q61179 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Irf9Q61179 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Irf9Q61179 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Irf9Q61179 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Irf9Q61179 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Irf9Q61179 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Irf9Q61179 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Irf9Q61179 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.74■□□□□ 0.91
Irf9Q61179 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Irf9Q61179 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
Irf9Q61179 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC20.74■□□□□ 0.91
Irf9Q61179 Gm12895-201ENSMUST00000122214 226 ntBASIC20.74■□□□□ 0.91
Irf9Q61179 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC20.74■□□□□ 0.91
Irf9Q61179 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.74■□□□□ 0.91
Irf9Q61179 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Irf9Q61179 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Irf9Q61179 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Irf9Q61179 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Irf9Q61179 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Irf9Q61179 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Irf9Q61179 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
Irf9Q61179 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Irf9Q61179 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.74■□□□□ 0.91
Irf9Q61179 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.74■□□□□ 0.91
Irf9Q61179 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Irf9Q61179 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Irf9Q61179 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Irf9Q61179 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Irf9Q61179 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Irf9Q61179 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Irf9Q61179 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC20.73■□□□□ 0.91
Irf9Q61179 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Irf9Q61179 Gm44430-201ENSMUST00000203376 995 ntBASIC20.73■□□□□ 0.91
Irf9Q61179 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC20.73■□□□□ 0.91
Irf9Q61179 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Irf9Q61179 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
Irf9Q61179 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Irf9Q61179 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms